BLASTX nr result

ID: Cimicifuga21_contig00033143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033143
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517005.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_003590109.1| hypothetical protein MTR_1g044470 [Medicago ...    57   2e-06

>ref|XP_002517005.1| conserved hypothetical protein [Ricinus communis]
           gi|223543640|gb|EEF45168.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 103

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
 Frame = +3

Query: 24  AMIVLVLTVHPYNATRILYDQEQYTSTKRSLVAESLQRGPVTPSGPSGCSYIPGNGRPSC 203
           A+++L   V  Y A+RILYDQ+      + L  +SLQRG    +G SGC+ IP  G PSC
Sbjct: 11  ALLLLSFHVQQYQASRILYDQD----VNKELGVQSLQRGDTPSTGASGCTNIPNTGGPSC 66

Query: 204 P--INGKKVVGNAFNRGRAFPHLLMPFGVA 287
           P  IN   V GN  +   A+P L + FG A
Sbjct: 67  PSVINSMNVAGNGLSHASAYPRLTVEFGAA 96


>ref|XP_003590109.1| hypothetical protein MTR_1g044470 [Medicago truncatula]
           gi|355479157|gb|AES60360.1| hypothetical protein
           MTR_1g044470 [Medicago truncatula]
          Length = 83

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/73 (36%), Positives = 43/73 (58%)
 Frame = +3

Query: 15  MVLAMIVLVLTVHPYNATRILYDQEQYTSTKRSLVAESLQRGPVTPSGPSGCSYIPGNGR 194
           +V  +++ ++ V P    R+L  +E        L  ++L +GPV PSGPSGC++IPG+G 
Sbjct: 9   LVFLLLLTIIHVRPNLGVRVLNMKE--------LRLQALDKGPVAPSGPSGCTFIPGSGG 60

Query: 195 PSCPINGKKVVGN 233
             CPI  + V G+
Sbjct: 61  THCPIEERNVAGH 73


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