BLASTX nr result

ID: Cimicifuga21_contig00033094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033094
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndr...    92   6e-17
emb|CBI17293.3| unnamed protein product [Vitis vinifera]               92   6e-17
emb|CAN83417.1| hypothetical protein VITISV_041350 [Vitis vinifera]    91   1e-16
ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-...    82   5e-14
ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-...    82   5e-14

>ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like
           exonuclease-like [Vitis vinifera]
          Length = 331

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = -1

Query: 217 PRNQSLSLLR-PHQVDIKVKYPSIKFGGHIVYCRTASEVEKATAELLKLVEAKQNSMDQI 41
           P N+ L+L   P Q + K++ P I FGGHIVY RT +EVEKATAELLK+VE K+  + Q 
Sbjct: 94  PTNRFLNLFHSPCQENFKMRLPKINFGGHIVYSRTVTEVEKATAELLKIVETKKKELGQA 153

Query: 40  TLGFDIEWRPTFR 2
            LGFDIEWRPTFR
Sbjct: 154 ILGFDIEWRPTFR 166


>emb|CBI17293.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = -1

Query: 217 PRNQSLSLLR-PHQVDIKVKYPSIKFGGHIVYCRTASEVEKATAELLKLVEAKQNSMDQI 41
           P N+ L+L   P Q + K++ P I FGGHIVY RT +EVEKATAELLK+VE K+  + Q 
Sbjct: 94  PTNRFLNLFHSPCQENFKMRLPKINFGGHIVYSRTVTEVEKATAELLKIVETKKKELGQA 153

Query: 40  TLGFDIEWRPTFR 2
            LGFDIEWRPTFR
Sbjct: 154 ILGFDIEWRPTFR 166


>emb|CAN83417.1| hypothetical protein VITISV_041350 [Vitis vinifera]
          Length = 229

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = -1

Query: 217 PRNQSLSLLR-PHQVDIKVKYPSIKFGGHIVYCRTASEVEKATAELLKLVEAKQNSMDQI 41
           P N+ L+L   P Q + K++ P + FGGHIVY RT +EVEKATAELLK+VE K+  + Q 
Sbjct: 94  PTNRFLNLFHSPCQENFKMRLPKMNFGGHIVYSRTVTEVEKATAELLKIVETKKKELGQA 153

Query: 40  TLGFDIEWRPTFR 2
            LGFDIEWRPTFR
Sbjct: 154 ILGFDIEWRPTFR 166


>ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 314

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/93 (43%), Positives = 64/93 (68%), Gaps = 6/93 (6%)
 Frame = -1

Query: 262 NENNSTSIDSGSKIYPRN------QSLSLLRPHQVDIKVKYPSIKFGGHIVYCRTASEVE 101
           NE +  S D+G ++ PR+         S L P +V+ K+++P++ +GG I+Y RT SEV+
Sbjct: 69  NEVSCVSPDTGRRL-PRSIFSHQSPRFSPLSPCRVNSKMRFPALNYGGRIIYSRTVSEVD 127

Query: 100 KATAELLKLVEAKQNSMDQITLGFDIEWRPTFR 2
           +A+ EL K + + + +MDQIT+GFDIEWRP+F+
Sbjct: 128 RASRELAKKINSTRKAMDQITIGFDIEWRPSFK 160


>ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 314

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/93 (43%), Positives = 64/93 (68%), Gaps = 6/93 (6%)
 Frame = -1

Query: 262 NENNSTSIDSGSKIYPRN------QSLSLLRPHQVDIKVKYPSIKFGGHIVYCRTASEVE 101
           NE +  S D+G ++ PR+         S L P +V+ K+++P++ +GG I+Y RT SEV+
Sbjct: 69  NEVSCVSPDTGRRL-PRSIFSHQSPRFSPLSPCRVNSKMRFPALNYGGRIIYSRTVSEVD 127

Query: 100 KATAELLKLVEAKQNSMDQITLGFDIEWRPTFR 2
           +A+ EL K + + + +MDQIT+GFDIEWRP+F+
Sbjct: 128 RASRELAKKINSTRKAMDQITIGFDIEWRPSFK 160


Top