BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033079
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|3...    63   3e-08
sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName:...    62   4e-08
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...    60   1e-07
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...    59   5e-07
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis...    59   5e-07

>ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|355488319|gb|AES69522.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 1567

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
 Frame = -2

Query: 247 LINVAEKKI*DPSMDSLKIIIDPLRNFISL----DEILHKLNQKLKVFGPGLLFGHVLT- 83
           L+N A+ K  DPSMDSLK+ IDP  N +S+    D +  +++Q+ KV+ P L+FGH+LT 
Sbjct: 77  LVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDGVPVEIHQEEKVYVPELIFGHLLTS 136

Query: 82  -----GVEFSGGRRIGCNTNFTNIFSKKLV 8
                 V+ + G R G     TNIFS + V
Sbjct: 137 SNYDDNVKKTTGGRNGYGAKLTNIFSTEFV 166


>sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
           II; AltName: Full=PsTopII gi|2330651|emb|CAA74891.1|
           topoisomerase II [Pisum sativum]
          Length = 1462

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
 Frame = -2

Query: 247 LINVAEKKI*DPSMDSLKIIIDPLRNFISL----DEILHKLNQKLKVFGPGLLFGHVLT- 83
           L+N A+ K  DPSMDSLK+ IDP  N +S+    D +  +++Q+ KV+ P L+FGH+LT 
Sbjct: 77  LVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDGVPVEIHQEEKVYVPELIFGHLLTS 136

Query: 82  -----GVEFSGGRRIGCNTNFTNIFSKKLV 8
                 V+ + G R G     TNIFS + +
Sbjct: 137 SNYDDNVKKTTGGRNGYGAKLTNIFSTEFI 166


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
           DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
 Frame = -2

Query: 247 LINVAEKKI*DPSMDSLKIIIDPLRNFISL----DEILHKLNQKLKVFGPGLLFGHVLTG 80
           L+N A+ K  DP MD+++++IDP +NFIS+    D I  +++Q+  V+ P L+FGH+LT 
Sbjct: 81  LVNAADNKQRDPKMDAVEVVIDPEQNFISVYNNGDGIPVEIHQEEGVYVPELIFGHLLTS 140

Query: 79  VEF------SGGRRIGCNTNFTNIFSKKLV 8
             +      + G R G     TNIFS + V
Sbjct: 141 SNYDDAEKKTTGGRNGYGAKLTNIFSTEFV 170


>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
           sativus]
          Length = 1460

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
 Frame = -2

Query: 247 LINVAEKKI*DPSMDSLKIIIDPLRNFISL----DEILHKLNQKLKVFGPGLLFGHVLTG 80
           L+N A+ K  DPSMDS+K+ ID  +N IS+    D +  +++Q+ KV+ P L+FGH+LT 
Sbjct: 86  LVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGDGVPVEIHQEEKVYVPELIFGHLLTS 145

Query: 79  VEF------SGGRRIGCNTNFTNIFSKKLV 8
             +      + G R G     TNIFS + V
Sbjct: 146 SNYDDTEKKTTGGRNGYGAKLTNIFSSEFV 175


>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
 Frame = -2

Query: 247 LINVAEKKI*DPSMDSLKIIIDPLRNFISL----DEILHKLNQKLKVFGPGLLFGHVLTG 80
           L+N A+ K  DPSMDS+K+ ID  +N IS+    D +  +++Q+ KV+ P L+FGH+LT 
Sbjct: 86  LVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGDGVPVEIHQEEKVYVPELIFGHLLTS 145

Query: 79  VEF------SGGRRIGCNTNFTNIFSKKLV 8
             +      + G R G     TNIFS + V
Sbjct: 146 SNYDDTEKKTTGGRNGYGAKLTNIFSSEFV 175