BLASTX nr result

ID: Cimicifuga21_contig00033056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033056
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    60   7e-10
emb|CAB82966.1| putative protein [Arabidopsis thaliana]                68   9e-10
ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...    54   3e-08

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 60.1 bits (144), Expect(2) = 7e-10
 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
 Frame = -3

Query: 258 KKTLSFDENRRWSNS*GG----------NQRDCLSACVQMVIIDELPFSFVEGRGFKVFC 109
           +KTLSF    +     G           N   C     +M+I+DEL F FV+G GF+ FC
Sbjct: 96  QKTLSFQSKNKEGEGEGDSGYTLLATSFNVEHCRKMLARMIIVDELAFRFVQGEGFRAFC 155

Query: 108 SVACPYFQVPSHRTLVRHFLSMYQDYKLKLKS 13
           S   P F +PS  T+ +    +Y   K KLKS
Sbjct: 156 SPLQPKFFIPSRATVAKDCSQLYSSEKKKLKS 187



 Score = 28.1 bits (61), Expect(2) = 7e-10
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 358 DYAADPSANGI*NLIKHIETQCKHYPGRKLDKKQKNT*F 242
           DYA     N   N+  H+ + C+ +P R  D KQK   F
Sbjct: 63  DYACHDKRNETSNMKAHLASGCQKHPFRCKDPKQKTLSF 101


>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
          Length = 705

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/64 (48%), Positives = 43/64 (67%)
 Frame = -3

Query: 204 NQRDCLSACVQMVIIDELPFSFVEGRGFKVFCSVACPYFQVPSHRTLVRHFLSMYQDYKL 25
           +Q  C  A V+M+I+DEL FSFVE  GFK FC +A P+F +PS RT+ R  + +Y+  K 
Sbjct: 106 DQNVCRQATVKMIIMDELSFSFVENDGFKHFCEMAVPWFTIPSRRTITRDVVGLYRAEKT 165

Query: 24  KLKS 13
            LK+
Sbjct: 166 ALKT 169


>ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|222837471|gb|EEE75850.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = -3

Query: 210 GGNQRDCLSACVQMVIIDELPFSFVEGRGFKVFCSVACPYFQVPSHRTLVRHFLSMYQDY 31
           G N  +C     +MVIIDELPF+FVEGRGFK+F     P F +PS  T++R  L +Y + 
Sbjct: 143 GYNYDECRQTLAKMVIIDELPFNFVEGRGFKLFARTMQPRFDIPSRFTIMRDCLKLYVEE 202

Query: 30  KLKLKS 13
           K +L++
Sbjct: 203 KDRLRT 208


>ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|222857665|gb|EEE95212.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/63 (46%), Positives = 44/63 (69%)
 Frame = -3

Query: 195 DCLSACVQMVIIDELPFSFVEGRGFKVFCSVACPYFQVPSHRTLVRHFLSMYQDYKLKLK 16
           +C  A V+MVIIDELPF+F+EG+GF++F     P F +PS  T++R  L ++ + K +LK
Sbjct: 148 ECRKALVKMVIIDELPFNFMEGKGFRLFSRTLQPRFDIPSRFTVMRDCLKLHVEEKERLK 207

Query: 15  SDI 7
            D+
Sbjct: 208 RDL 210


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score = 53.9 bits (128), Expect(2) = 3e-08
 Identities = 25/57 (43%), Positives = 35/57 (61%)
 Frame = -3

Query: 183  ACVQMVIIDELPFSFVEGRGFKVFCSVACPYFQVPSHRTLVRHFLSMYQDYKLKLKS 13
            A  +M+I+DELPFSFVE  GF+ F SV  P   +P    + R  L++Y   K KL++
Sbjct: 1046 ALARMIIVDELPFSFVENEGFRYFMSVTQPRLPLPGRLAIARDCLNLYTSEKHKLRN 1102



 Score = 28.9 bits (63), Expect(2) = 3e-08
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 355  YAADPSANGI*NLIKHIETQCKHYP 281
            YAAD   +G  NL  H+  QCK +P
Sbjct: 981  YAADSHNSGTSNLSTHLRKQCKKFP 1005


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