BLASTX nr result

ID: Cimicifuga21_contig00033052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033052
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138668.1| PREDICTED: queuine tRNA-ribosyltransferase s...    88   6e-16
emb|CBI31361.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase s...    86   4e-15
emb|CAN82729.1| hypothetical protein VITISV_035707 [Vitis vinifera]    86   4e-15
ref|NP_001240906.1| uncharacterized protein LOC100778880 [Glycin...    83   2e-14

>ref|XP_004138668.1| PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like
           [Cucumis sativus] gi|449490166|ref|XP_004158527.1|
           PREDICTED: queuine tRNA-ribosyltransferase subunit
           qtrtd1-like [Cucumis sativus]
          Length = 399

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/81 (56%), Positives = 55/81 (67%)
 Frame = +2

Query: 41  MRFTVKAWSSGGRARVGVLELGSCPTAMETPSLLLSTRKGLPLFIXXXXXXXXXXXXXXX 220
           M+F VKAWS+G +AR G L+LG+CP A++TP+LLLSTRKGLP FI               
Sbjct: 1   MKFAVKAWSNG-KARTGFLQLGNCPAAIDTPALLLSTRKGLPHFISPDLLPSLPSPDSHL 59

Query: 221 XQVSPLHFLECPSPKVISSIG 283
            Q SPLHFLE PS K IS+IG
Sbjct: 60  LQFSPLHFLEGPSSKTISNIG 80


>emb|CBI31361.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/81 (56%), Positives = 54/81 (66%)
 Frame = +2

Query: 41  MRFTVKAWSSGGRARVGVLELGSCPTAMETPSLLLSTRKGLPLFIXXXXXXXXXXXXXXX 220
           M+F V AWS G RARVGVL+L +CP  METP+LLLSTRKGLP+FI               
Sbjct: 1   MKFAVTAWSKG-RARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPDSHL 59

Query: 221 XQVSPLHFLECPSPKVISSIG 283
            Q+SPLHFL+  S K IS+IG
Sbjct: 60  LQMSPLHFLDGISSKTISNIG 80


>ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 [Vitis
           vinifera]
          Length = 399

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/81 (56%), Positives = 54/81 (66%)
 Frame = +2

Query: 41  MRFTVKAWSSGGRARVGVLELGSCPTAMETPSLLLSTRKGLPLFIXXXXXXXXXXXXXXX 220
           M+F V AWS G RARVGVL+L +CP  METP+LLLSTRKGLP+FI               
Sbjct: 1   MKFAVTAWSKG-RARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPDSHL 59

Query: 221 XQVSPLHFLECPSPKVISSIG 283
            Q+SPLHFL+  S K IS+IG
Sbjct: 60  LQMSPLHFLDGISSKTISNIG 80


>emb|CAN82729.1| hypothetical protein VITISV_035707 [Vitis vinifera]
          Length = 383

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/81 (56%), Positives = 54/81 (66%)
 Frame = +2

Query: 41  MRFTVKAWSSGGRARVGVLELGSCPTAMETPSLLLSTRKGLPLFIXXXXXXXXXXXXXXX 220
           M+F V AWS G RARVGVL+L +CP  METP+LLLSTRKGLP+FI               
Sbjct: 1   MKFAVTAWSKG-RARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPDSHL 59

Query: 221 XQVSPLHFLECPSPKVISSIG 283
            Q+SPLHFL+  S K IS+IG
Sbjct: 60  LQMSPLHFLDGISSKTISNIG 80


>ref|NP_001240906.1| uncharacterized protein LOC100778880 [Glycine max]
           gi|255634786|gb|ACU17754.1| unknown [Glycine max]
          Length = 401

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +2

Query: 41  MRFTVK-AWSSGGRARVGVLELGSCPTAMETPSLLLSTRKGLPLFIXXXXXXXXXXXXXX 217
           M+F VK AWSSGG  RVG LE+GSCP  +ETP+LLLSTRKGLP FI              
Sbjct: 4   MKFVVKKAWSSGGCGRVGALEMGSCPGPIETPALLLSTRKGLPHFISPDLLTSLPSPDSH 63

Query: 218 XXQVSPLHFLECPSPKVISSIG 283
             Q+SPLHFLE  +   IS +G
Sbjct: 64  LLQISPLHFLEGLASTTISKLG 85


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