BLASTX nr result

ID: Cimicifuga21_contig00033039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033039
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263587.1| PREDICTED: chloride channel ClC5 [Vitis vini...   167   8e-40
emb|CBI25542.3| unnamed protein product [Vitis vinifera]              167   8e-40
emb|CAN62616.1| hypothetical protein VITISV_036165 [Vitis vinifera]   167   8e-40
ref|XP_002331024.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   158   5e-37
ref|XP_002530769.1| chloride channel clc, putative [Ricinus comm...   156   2e-36

>ref|XP_002263587.1| PREDICTED: chloride channel ClC5 [Vitis vinifera]
           gi|301318136|gb|ADK66983.1| chloride channel ClC5 [Vitis
           vinifera]
          Length = 770

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/122 (70%), Positives = 93/122 (76%)
 Frame = -2

Query: 366 VAPVGLFVPVIVAGASYGRYVGILVGSHTSLNHGLFAVLGSASLLGGSMRMTVSXXXXXX 187
           VAP GLFVPVIV GASYGR+VG+LVGSH++LNHGLFAVLG+ASLLGGSMRMTVS      
Sbjct: 460 VAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGAASLLGGSMRMTVSLCVIIL 519

Query: 186 XXXXXXXXXXXXXXXXLVSKTVADTFNGNIYDIIMKMKGFPYLEAHVEPYMRQLAVSDVV 7
                           LVSKTVAD FNGN+YDIIMK+KGFPYLEAH EPYMRQL V DVV
Sbjct: 520 ELTNNLLLLPLIMVVLLVSKTVADAFNGNVYDIIMKLKGFPYLEAHAEPYMRQLTVEDVV 579

Query: 6   KG 1
            G
Sbjct: 580 TG 581


>emb|CBI25542.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/122 (70%), Positives = 93/122 (76%)
 Frame = -2

Query: 366 VAPVGLFVPVIVAGASYGRYVGILVGSHTSLNHGLFAVLGSASLLGGSMRMTVSXXXXXX 187
           VAP GLFVPVIV GASYGR+VG+LVGSH++LNHGLFAVLG+ASLLGGSMRMTVS      
Sbjct: 462 VAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGAASLLGGSMRMTVSLCVIIL 521

Query: 186 XXXXXXXXXXXXXXXXLVSKTVADTFNGNIYDIIMKMKGFPYLEAHVEPYMRQLAVSDVV 7
                           LVSKTVAD FNGN+YDIIMK+KGFPYLEAH EPYMRQL V DVV
Sbjct: 522 ELTNNLLLLPLIMVVLLVSKTVADAFNGNVYDIIMKLKGFPYLEAHAEPYMRQLTVEDVV 581

Query: 6   KG 1
            G
Sbjct: 582 TG 583


>emb|CAN62616.1| hypothetical protein VITISV_036165 [Vitis vinifera]
          Length = 805

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/122 (70%), Positives = 93/122 (76%)
 Frame = -2

Query: 366 VAPVGLFVPVIVAGASYGRYVGILVGSHTSLNHGLFAVLGSASLLGGSMRMTVSXXXXXX 187
           VAP GLFVPVIV GASYGR+VG+LVGSH++LNHGLFAVLG+ASLLGGSMRMTVS      
Sbjct: 495 VAPAGLFVPVIVTGASYGRFVGMLVGSHSNLNHGLFAVLGAASLLGGSMRMTVSLCVIIL 554

Query: 186 XXXXXXXXXXXXXXXXLVSKTVADTFNGNIYDIIMKMKGFPYLEAHVEPYMRQLAVSDVV 7
                           LVSKTVAD FNGN+YDIIMK+KGFPYLEAH EPYMRQL V DVV
Sbjct: 555 ELTNNLLLLPLIMVVLLVSKTVADAFNGNVYDIIMKLKGFPYLEAHAEPYMRQLTVEDVV 614

Query: 6   KG 1
            G
Sbjct: 615 TG 616


>ref|XP_002331024.1| Cl-channel clc-7 [Populus trichocarpa] gi|222872954|gb|EEF10085.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 775

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/122 (64%), Positives = 91/122 (74%)
 Frame = -2

Query: 366 VAPVGLFVPVIVAGASYGRYVGILVGSHTSLNHGLFAVLGSASLLGGSMRMTVSXXXXXX 187
           VAP GLF+PVIV GASYGR+VG+LVGSH++L+HGL+AVLG+AS LGGSMRMTVS      
Sbjct: 465 VAPAGLFIPVIVTGASYGRFVGMLVGSHSNLDHGLYAVLGAASFLGGSMRMTVSLCVIIL 524

Query: 186 XXXXXXXXXXXXXXXXLVSKTVADTFNGNIYDIIMKMKGFPYLEAHVEPYMRQLAVSDVV 7
                           L+SKTVAD FNGNIYD+IM  KGFPYLEAH EPYMRQL V +VV
Sbjct: 525 ELTNNLLMLPLIMLVLLISKTVADAFNGNIYDLIMNAKGFPYLEAHTEPYMRQLTVGEVV 584

Query: 6   KG 1
           +G
Sbjct: 585 RG 586


>ref|XP_002530769.1| chloride channel clc, putative [Ricinus communis]
           gi|223529685|gb|EEF31629.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 775

 Score =  156 bits (394), Expect = 2e-36
 Identities = 81/122 (66%), Positives = 87/122 (71%)
 Frame = -2

Query: 366 VAPVGLFVPVIVAGASYGRYVGILVGSHTSLNHGLFAVLGSASLLGGSMRMTVSXXXXXX 187
           V P GLFVPVIV GASYGR VG+L+GS   LNHGL+AVLG+ASLLGGSMRMTVS      
Sbjct: 466 VVPAGLFVPVIVTGASYGRLVGMLIGSRYGLNHGLYAVLGAASLLGGSMRMTVSLCVIIL 525

Query: 186 XXXXXXXXXXXXXXXXLVSKTVADTFNGNIYDIIMKMKGFPYLEAHVEPYMRQLAVSDVV 7
                           L+SKTVAD FNGNIYD+IMK KGFPYLE H EPYMRQL VSDVV
Sbjct: 526 ELTNNLLLLPLIMLVLLISKTVADAFNGNIYDLIMKAKGFPYLETHAEPYMRQLTVSDVV 585

Query: 6   KG 1
            G
Sbjct: 586 MG 587


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