BLASTX nr result

ID: Cimicifuga21_contig00033033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033033
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26465.3| unnamed protein product [Vitis vinifera]              167   6e-40
emb|CAN71104.1| hypothetical protein VITISV_000039 [Vitis vinifera]   164   7e-39
ref|XP_002520087.1| origin recognition complex subunit, putative...   155   4e-36
ref|NP_197171.2| origin recognition complex subunit 3 [Arabidops...   152   3e-35
emb|CAC01833.1| putative protein [Arabidopsis thaliana]               152   3e-35

>emb|CBI26465.3| unnamed protein product [Vitis vinifera]
          Length = 4326

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/103 (76%), Positives = 92/103 (89%)
 Frame = +2

Query: 2   TKNVEFVDDLLTFKDLNLHLKSHGCHVVNLSSLDFSAKNGIGGCIRSLLRQLVMVAPDVA 181
           TKN+EFVDDL+TF++L LHLKSHGCHV NLSS+DFSA NGIGGC+RSLLRQ +MV  D A
Sbjct: 142 TKNMEFVDDLMTFEELGLHLKSHGCHVANLSSIDFSANNGIGGCLRSLLRQFLMVTLDAA 201

Query: 182 DITILASWYSEPENYDSPLVVIIDDLERCNGSVLSDFILLLSE 310
           DI+ILASWYS+  NY+ P+VVIIDD+ERC GSVLSDFIL+LSE
Sbjct: 202 DISILASWYSDQGNYNKPVVVIIDDMERCCGSVLSDFILMLSE 244


>emb|CAN71104.1| hypothetical protein VITISV_000039 [Vitis vinifera]
          Length = 244

 Score =  164 bits (415), Expect = 7e-39
 Identities = 77/101 (76%), Positives = 90/101 (89%)
 Frame = +2

Query: 2   TKNVEFVDDLLTFKDLNLHLKSHGCHVVNLSSLDFSAKNGIGGCIRSLLRQLVMVAPDVA 181
           TKN+EFVDDL+TF++L LHLKSHGCHV NLSS+DFSA NGIGGC+RSLLRQ +MV  D A
Sbjct: 142 TKNMEFVDDLMTFEELGLHLKSHGCHVANLSSIDFSANNGIGGCLRSLLRQFLMVTLDAA 201

Query: 182 DITILASWYSEPENYDSPLVVIIDDLERCNGSVLSDFILLL 304
           DI+ILASWYS+  NY+ P+VVIIDD+ERC GSVLSDFIL+L
Sbjct: 202 DISILASWYSDQGNYNKPVVVIIDDMERCCGSVLSDFILML 242


>ref|XP_002520087.1| origin recognition complex subunit, putative [Ricinus communis]
           gi|223540851|gb|EEF42411.1| origin recognition complex
           subunit, putative [Ricinus communis]
          Length = 715

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/103 (72%), Positives = 87/103 (84%)
 Frame = +2

Query: 2   TKNVEFVDDLLTFKDLNLHLKSHGCHVVNLSSLDFSAKNGIGGCIRSLLRQLVMVAPDVA 181
           TKN+EF DDLLTFK+L LHLKS GC+V NLSSLDFS KNGIGGC+RSLLRQLVMV  D  
Sbjct: 155 TKNLEFADDLLTFKELGLHLKSQGCYVANLSSLDFSVKNGIGGCLRSLLRQLVMVTLDAP 214

Query: 182 DITILASWYSEPENYDSPLVVIIDDLERCNGSVLSDFILLLSE 310
           DI+ILA+WY E  +  +P+V+IIDDLERC GSVLSDFI++L E
Sbjct: 215 DISILATWYREQGDCTNPVVIIIDDLERCCGSVLSDFIIMLCE 257


>ref|NP_197171.2| origin recognition complex subunit 3 [Arabidopsis thaliana]
           gi|47681285|gb|AAT37463.1| origin recognition complex
           protein 3 [Arabidopsis thaliana]
           gi|332004943|gb|AED92326.1| origin recognition complex
           subunit 3 [Arabidopsis thaliana]
          Length = 734

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/103 (67%), Positives = 87/103 (84%)
 Frame = +2

Query: 2   TKNVEFVDDLLTFKDLNLHLKSHGCHVVNLSSLDFSAKNGIGGCIRSLLRQLVMVAPDVA 181
           T+N+E VDDLLTF++L LHLKS GCHV  LSS+DFSAK+G+GGC+R LLRQ VM   DVA
Sbjct: 159 TRNLEMVDDLLTFEELELHLKSQGCHVAKLSSMDFSAKSGVGGCLRGLLRQFVMPTVDVA 218

Query: 182 DITILASWYSEPENYDSPLVVIIDDLERCNGSVLSDFILLLSE 310
           D+TILASWY E +N+++P+V+I+DD ERC G VLSD IL+LSE
Sbjct: 219 DVTILASWYRENKNHENPVVIIVDDTERCCGPVLSDLILILSE 261


>emb|CAC01833.1| putative protein [Arabidopsis thaliana]
          Length = 556

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/103 (67%), Positives = 87/103 (84%)
 Frame = +2

Query: 2   TKNVEFVDDLLTFKDLNLHLKSHGCHVVNLSSLDFSAKNGIGGCIRSLLRQLVMVAPDVA 181
           T+N+E VDDLLTF++L LHLKS GCHV  LSS+DFSAK+G+GGC+R LLRQ VM   DVA
Sbjct: 152 TRNLEMVDDLLTFEELELHLKSQGCHVAKLSSMDFSAKSGVGGCLRGLLRQFVMPTVDVA 211

Query: 182 DITILASWYSEPENYDSPLVVIIDDLERCNGSVLSDFILLLSE 310
           D+TILASWY E +N+++P+V+I+DD ERC G VLSD IL+LSE
Sbjct: 212 DVTILASWYRENKNHENPVVIIVDDTERCCGPVLSDLILILSE 254


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