BLASTX nr result

ID: Cimicifuga21_contig00033025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033025
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]    57   1e-06
emb|CBI30347.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    57   2e-06

>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/76 (42%), Positives = 39/76 (51%)
 Frame = +2

Query: 20  MSFIRRXXXXXXXXXXXXXXXXXXXXXLSALLKTCQNLRHLEQIHSQIIQKGLEQHHILI 199
           M+FIRR                     +S LLK C     LEQ+H++II+KGL Q H LI
Sbjct: 1   MTFIRRYTALTFPDYLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFLI 60

Query: 200 TQFLVCLCNSFPNLHY 247
           +QFL  LCNS  N  Y
Sbjct: 61  SQFLT-LCNSLSNFSY 75


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 42/82 (51%)
 Frame = +2

Query: 2   SLLTPHMSFIRRXXXXXXXXXXXXXXXXXXXXXLSALLKTCQNLRHLEQIHSQIIQKGLE 181
           S++   M+FIRR                     +S LLK C     LEQ+H++II+KGL 
Sbjct: 43  SIIFLPMTFIRRYTALTFPDYLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLH 102

Query: 182 QHHILITQFLVCLCNSFPNLHY 247
           Q H +I+QFL  LCNS  N  Y
Sbjct: 103 QDHFIISQFLT-LCNSLSNFSY 123


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/76 (40%), Positives = 39/76 (51%)
 Frame = +2

Query: 20  MSFIRRXXXXXXXXXXXXXXXXXXXXXLSALLKTCQNLRHLEQIHSQIIQKGLEQHHILI 199
           M+FIRR                     +S LLK C     LEQ+H++II+KGL Q H +I
Sbjct: 1   MTFIRRYTALTFPDYLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFII 60

Query: 200 TQFLVCLCNSFPNLHY 247
           +QFL  LCNS  N  Y
Sbjct: 61  SQFLT-LCNSLSNFSY 75


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