BLASTX nr result

ID: Cimicifuga21_contig00033022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033022
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containi...   238   6e-61
emb|CBI24637.3| unnamed protein product [Vitis vinifera]              238   6e-61
emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]   226   3e-57
ref|XP_002530303.1| ATP binding protein, putative [Ricinus commu...   202   3e-50
ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|2...   200   2e-49

>ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Vitis vinifera]
          Length = 237

 Score =  238 bits (607), Expect = 6e-61
 Identities = 115/168 (68%), Positives = 141/168 (83%)
 Frame = +2

Query: 2   NNKLSRLLKADLIDTLTELKRQNEWELAHKVFDYIRKEIWYKPDLSLYCDMILMFGKNKM 181
           ++++SRLLK+DL+DTL EL+RQ E +L  KVF++IRKE+WYKPDLSLY DMI++ GK K+
Sbjct: 70  SSRVSRLLKSDLLDTLAELQRQGELDLTLKVFEFIRKEVWYKPDLSLYSDMIMILGKKKL 129

Query: 182 IENAQQIFVELMKDGLVPDTRTYAEMIGAFLQVGMVEKAMEMYEVMKESGSVPDKLTLTI 361
           IE A+ +F EL K+GL PDTR Y EMIGA+LQVGM EKAMEMY +MK SG  PDKLTLTI
Sbjct: 130 IEMAEGLFSELKKEGLEPDTRVYTEMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTI 189

Query: 362 LIRNLEKVGEEELALLVKKDCVEYVDYPEKFLQEVGQKYPKRKSLELV 505
           LIRNLE  GEEELA  VKK+C EYVDYP+KFL+E+ +KYPKR+S+ LV
Sbjct: 190 LIRNLENAGEEELAAGVKKECEEYVDYPKKFLEEIEKKYPKRRSVNLV 237


>emb|CBI24637.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  238 bits (607), Expect = 6e-61
 Identities = 115/168 (68%), Positives = 141/168 (83%)
 Frame = +2

Query: 2   NNKLSRLLKADLIDTLTELKRQNEWELAHKVFDYIRKEIWYKPDLSLYCDMILMFGKNKM 181
           ++++SRLLK+DL+DTL EL+RQ E +L  KVF++IRKE+WYKPDLSLY DMI++ GK K+
Sbjct: 75  SSRVSRLLKSDLLDTLAELQRQGELDLTLKVFEFIRKEVWYKPDLSLYSDMIMILGKKKL 134

Query: 182 IENAQQIFVELMKDGLVPDTRTYAEMIGAFLQVGMVEKAMEMYEVMKESGSVPDKLTLTI 361
           IE A+ +F EL K+GL PDTR Y EMIGA+LQVGM EKAMEMY +MK SG  PDKLTLTI
Sbjct: 135 IEMAEGLFSELKKEGLEPDTRVYTEMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTI 194

Query: 362 LIRNLEKVGEEELALLVKKDCVEYVDYPEKFLQEVGQKYPKRKSLELV 505
           LIRNLE  GEEELA  VKK+C EYVDYP+KFL+E+ +KYPKR+S+ LV
Sbjct: 195 LIRNLENAGEEELAAGVKKECEEYVDYPKKFLEEIEKKYPKRRSVNLV 242


>emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]
          Length = 303

 Score =  226 bits (575), Expect = 3e-57
 Identities = 109/159 (68%), Positives = 133/159 (83%)
 Frame = +2

Query: 2   NNKLSRLLKADLIDTLTELKRQNEWELAHKVFDYIRKEIWYKPDLSLYCDMILMFGKNKM 181
           ++++SRLLK+DL+DTL EL+RQ E +L  KVF++IRKE+WYKPDLSLY DMI++ GK K+
Sbjct: 70  SSRVSRLLKSDLLDTLAELQRQGELDLTLKVFEFIRKEVWYKPDLSLYSDMIMILGKKKL 129

Query: 182 IENAQQIFVELMKDGLVPDTRTYAEMIGAFLQVGMVEKAMEMYEVMKESGSVPDKLTLTI 361
           IE A+ +F EL K+GL PDTR Y EMIGA+LQVGM EKAMEMY +MK SG  PDKLTLTI
Sbjct: 130 IEMAEGLFSELKKEGLEPDTRVYTEMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTI 189

Query: 362 LIRNLEKVGEEELALLVKKDCVEYVDYPEKFLQEVGQKY 478
           LIRNLE  GEEELA  VKK+C EYVDYP+KFL+E+ +KY
Sbjct: 190 LIRNLENAGEEELAAGVKKECEEYVDYPKKFLEEIEKKY 228


>ref|XP_002530303.1| ATP binding protein, putative [Ricinus communis]
           gi|223530159|gb|EEF32070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 244

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/158 (63%), Positives = 124/158 (78%)
 Frame = +2

Query: 2   NNKLSRLLKADLIDTLTELKRQNEWELAHKVFDYIRKEIWYKPDLSLYCDMILMFGKNKM 181
           N KLSRLLK DL+D L  L++QNE +LA KVF++++KEIWYKPDL+LY  MI M GKNKM
Sbjct: 74  NTKLSRLLKTDLLDVLEILQKQNELDLALKVFEFVQKEIWYKPDLTLYYGMIEMLGKNKM 133

Query: 182 IENAQQIFVELMKDGLVPDTRTYAEMIGAFLQVGMVEKAMEMYEVMKESGSVPDKLTLTI 361
            E A+  F +L K+GL PDTR + EMIGA+L+VG  EKAMEMY  MKESG VPDKLT  I
Sbjct: 134 TEMAEGYFSKLEKEGLKPDTRAFNEMIGAYLKVGTTEKAMEMYGRMKESGCVPDKLTFVI 193

Query: 362 LIRNLEKVGEEELALLVKKDCVEYVDYPEKFLQEVGQK 475
           LIRNLE+ G  +L  ++KK+C +Y+DYPEKFL+EV +K
Sbjct: 194 LIRNLEEAGRNDLVDIIKKECGDYMDYPEKFLEEVERK 231


>ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|222852675|gb|EEE90222.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  200 bits (508), Expect = 2e-49
 Identities = 99/159 (62%), Positives = 126/159 (79%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   NNKLSRLLKADLIDTLTELKRQNEWELAHKVFDYIRKEIWYKPDLSLYCDMILMFGKNKM 181
           N+KLSRLLK DL+DTL  L+ QNE +LA KVF+++RKE+WYKPD+ LY  MI M G+NKM
Sbjct: 72  NSKLSRLLKTDLLDTLAVLQNQNELDLALKVFEFVRKEVWYKPDILLYHAMIQMVGRNKM 131

Query: 182 IENAQQIFVELMKD-GLVPDTRTYAEMIGAFLQVGMVEKAMEMYEVMKESGSVPDKLTLT 358
           +E A++ F +L K+ GL PDTR + EMIGA+LQVGM++KAME YE MK SG  PDKLT  
Sbjct: 132 VEMAEEFFGKLEKEEGLKPDTRAFTEMIGAYLQVGMIDKAMETYERMKASGCDPDKLTFR 191

Query: 359 ILIRNLEKVGEEELALLVKKDCVEYVDYPEKFLQEVGQK 475
           ILIRNLE  G+EEL   +KK+C +Y+DYP+KFL+EV +K
Sbjct: 192 ILIRNLEDAGKEELVDRIKKECGDYMDYPKKFLEEVERK 230