BLASTX nr result

ID: Cimicifuga21_contig00033017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033017
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529751.1| conserved hypothetical protein [Ricinus comm...   153   1e-35
ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vit...   149   2e-34
ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vit...   149   2e-34
ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33

>ref|XP_002529751.1| conserved hypothetical protein [Ricinus communis]
           gi|223530749|gb|EEF32617.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/99 (69%), Positives = 82/99 (82%)
 Frame = -1

Query: 297 SSSGKNNRCAYNGCKSKAMVLTNYCHPHILSDTKQKLYKACSYIIKSPHTGPVHCGKPIL 118
           ++S  NNRC + GCK KAM LT++CH HILSD KQKLYK C Y+IKS   GP+ CGKPIL
Sbjct: 179 NNSNNNNRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPIL 238

Query: 117 RATVPSLCSAHFEKAQVHVTRALKKAGLNISSASKLAPK 1
           R++ PSLC+ HF+KAQ HVTRALKKAGLN+SS+SKLAPK
Sbjct: 239 RSSAPSLCTVHFQKAQKHVTRALKKAGLNVSSSSKLAPK 277


>ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 248

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/103 (66%), Positives = 82/103 (79%)
 Frame = -1

Query: 309 VGVGSSSGKNNRCAYNGCKSKAMVLTNYCHPHILSDTKQKLYKACSYIIKSPHTGPVHCG 130
           +G+G +     RCA +GCKSKAM LT +CHPHILSD+KQKLYK CS++IKS   GPV CG
Sbjct: 100 LGIGENGFDVKRCAVSGCKSKAMALTRFCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCG 159

Query: 129 KPILRATVPSLCSAHFEKAQVHVTRALKKAGLNISSASKLAPK 1
           KPILR+TVPSLC  HF+KA+  V  ALKKAGLN +S+SKLAPK
Sbjct: 160 KPILRSTVPSLCPIHFQKAERQVNNALKKAGLNAASSSKLAPK 202


>ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 237

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/103 (66%), Positives = 82/103 (79%)
 Frame = -1

Query: 309 VGVGSSSGKNNRCAYNGCKSKAMVLTNYCHPHILSDTKQKLYKACSYIIKSPHTGPVHCG 130
           +G+G +     RCA +GCKSKAM LT +CHPHILSD+KQKLYK CS++IKS   GPV CG
Sbjct: 100 LGIGENGFDVKRCAVSGCKSKAMALTRFCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCG 159

Query: 129 KPILRATVPSLCSAHFEKAQVHVTRALKKAGLNISSASKLAPK 1
           KPILR+TVPSLC  HF+KA+  V  ALKKAGLN +S+SKLAPK
Sbjct: 160 KPILRSTVPSLCPIHFQKAERQVNNALKKAGLNAASSSKLAPK 202


>ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|222853349|gb|EEE90896.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  147 bits (370), Expect = 1e-33
 Identities = 65/94 (69%), Positives = 79/94 (84%)
 Frame = -1

Query: 282 NNRCAYNGCKSKAMVLTNYCHPHILSDTKQKLYKACSYIIKSPHTGPVHCGKPILRATVP 103
           N+RC + GCK KAM LT++CH HILSD KQKLYK C Y+IKS   GP+ CGKPILR+T P
Sbjct: 163 NHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAP 222

Query: 102 SLCSAHFEKAQVHVTRALKKAGLNISSASKLAPK 1
           +LC+ HF+KAQ HVT+AL+KAGLN+SS+SKLAPK
Sbjct: 223 ALCTVHFQKAQKHVTQALRKAGLNVSSSSKLAPK 256


>ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|222870384|gb|EEF07515.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  145 bits (365), Expect = 4e-33
 Identities = 65/94 (69%), Positives = 78/94 (82%)
 Frame = -1

Query: 282 NNRCAYNGCKSKAMVLTNYCHPHILSDTKQKLYKACSYIIKSPHTGPVHCGKPILRATVP 103
           N+RC + GCK KAM LT++CH HILSD KQKLYK C Y+IKS   GP+ CGKPILR+T P
Sbjct: 129 NHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAP 188

Query: 102 SLCSAHFEKAQVHVTRALKKAGLNISSASKLAPK 1
           SLC+ H +KAQ HVT+AL+KAGLN+SS+SKLAPK
Sbjct: 189 SLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPK 222


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