BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032998
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554896.1| PREDICTED: uncharacterized protein LOC100786...    59   9e-18
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    60   1e-17
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]     60   1e-17
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...    60   1e-17
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]    63   3e-17

>ref|XP_003554896.1| PREDICTED: uncharacterized protein LOC100786145 [Glycine max]
          Length = 649

 Score = 58.5 bits (140), Expect(2) = 9e-18
 Identities = 34/102 (33%), Positives = 45/102 (44%)
 Frame = +1

Query: 430 YHQLIGSLQYMTLTPLGIVYDIHHVVQFMXXXXXXXXXXXXXNFTLSHTYLRFWLGFWPS 609
           YH L+ +LQY+T T   I Y +  +  +M                       F L   PS
Sbjct: 213 YHSLVDALQYLTFTRPDISYAVQQICLYMHDPRTSHFATLKHIIRYIQGRKEFGLHLSPS 272

Query: 610 PCTLYLHAFSDVDWARCLDTHHSAKGLCVFLSPNLISCTAKK 735
             T  L  +SD DW  C DT  S  G CV+L  NLIS ++K+
Sbjct: 273 TIT-NLSTYSDADWGDCPDTRRSTSGYCVYLGDNLISWSSKR 313



 Score = 57.8 bits (138), Expect(2) = 9e-18
 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
 Frame = +2

Query: 56  YKPIFQLNLFRADDSIVVYKTGPQLMVLLFYVDE**HCAHR*HFF--VIVFSLHSWP*V* 229
           YK    +N  + + S+ +Y  G     +L YVD+  H     H     I+ +L S     
Sbjct: 88  YKARLVVNGSKTNHSLFIYTHGDDTTYILLYVDDIIHTTSS-HSLRDTIIAALRSE--FS 144

Query: 230 IKDLGPLSLLFGH*GYIHAPGLYLSQTKYTLDLIHHSNIINCKPLNITLSATSQLSAFDG 409
           + DLGPL+   G     H+ GL+L Q+KY  D+I  + ++NCKP    +   S+LSA  G
Sbjct: 145 MMDLGPLNYFLGVSTTRHSGGLFLHQSKYAEDIISRAKMVNCKPALTPMDTKSKLSATSG 204

Query: 410 SPLATP 427
                P
Sbjct: 205 EKFDDP 210


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 60.5 bits (145), Expect(2) = 1e-17
 Identities = 37/102 (36%), Positives = 46/102 (45%)
 Frame = +1

Query: 430  YHQLIGSLQYMTLTPLGIVYDIHHVVQFMXXXXXXXXXXXXXNFTLSHTYLRFWLGFWPS 609
            Y  L G+LQY+TLT   I Y I  V  FM                     L   L    +
Sbjct: 1124 YRSLAGALQYLTLTRPEIAYAIQQVCLFMHDPREPHLALVKRILRYIKGTLHICLHIGTA 1183

Query: 610  PCTLYLHAFSDVDWARCLDTHHSAKGLCVFLSPNLISCTAKK 735
            P    L A+SD DW  C D+ HS  G CVFL  NL+S ++K+
Sbjct: 1184 PVDS-LTAYSDADWVGCPDSRHSTSGYCVFLGENLVSWSSKR 1224



 Score = 55.1 bits (131), Expect(2) = 1e-17
 Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = +2

Query: 89   ADDSIVVYKTGPQLMVLLFYVDE**HCAHR*HFFV-IVFSLHSWP*V*IKDLGPLSLLFG 265
            +D S+ +YK G  +  LL YVD+    A        I   LHS     + DLG L    G
Sbjct: 1010 SDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSE--FAMTDLGDLHFFLG 1067

Query: 266  H*GYIHAPGLYLSQTKYTLDLIHHSNIINCKPLNITLSATSQLSAFDGSPLATP 427
                  A GL+LSQ +Y +DL+  + +  C P    + A  +LSA DG+P++ P
Sbjct: 1068 ISVTRSADGLFLSQWQYAVDLLRRAGMSECHPTATPVDARCKLSATDGAPVSDP 1121


>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
          Length = 1146

 Score = 60.5 bits (145), Expect(2) = 1e-17
 Identities = 37/102 (36%), Positives = 46/102 (45%)
 Frame = +1

Query: 430  YHQLIGSLQYMTLTPLGIVYDIHHVVQFMXXXXXXXXXXXXXNFTLSHTYLRFWLGFWPS 609
            Y  L G+LQY+TLT   I Y I  V  FM                     L   L    +
Sbjct: 1020 YRSLAGALQYLTLTRPEIAYAIQQVCLFMHDPREPHLALVKRILRYIKGTLHICLHIGTA 1079

Query: 610  PCTLYLHAFSDVDWARCLDTHHSAKGLCVFLSPNLISCTAKK 735
            P    L A+SD DW  C D+ HS  G CVFL  NL+S ++K+
Sbjct: 1080 PVDS-LTAYSDADWVGCPDSRHSTSGYCVFLGENLVSWSSKR 1120



 Score = 55.1 bits (131), Expect(2) = 1e-17
 Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = +2

Query: 89   ADDSIVVYKTGPQLMVLLFYVDE**HCAHR*HFFV-IVFSLHSWP*V*IKDLGPLSLLFG 265
            +D S+ +YK G  +  LL YVD+    A        I   LHS     + DLG L    G
Sbjct: 906  SDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSE--FAMTDLGDLHFFLG 963

Query: 266  H*GYIHAPGLYLSQTKYTLDLIHHSNIINCKPLNITLSATSQLSAFDGSPLATP 427
                  A GL+LSQ +Y +DL+  + +  C P    + A  +LSA DG+P++ P
Sbjct: 964  ISVTRSADGLFLSQWQYAVDLLRRAGMSECHPTATPVDARCKLSATDGAPVSDP 1017


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1050

 Score = 60.5 bits (145), Expect(2) = 1e-17
 Identities = 37/102 (36%), Positives = 46/102 (45%)
 Frame = +1

Query: 430  YHQLIGSLQYMTLTPLGIVYDIHHVVQFMXXXXXXXXXXXXXNFTLSHTYLRFWLGFWPS 609
            Y  L G+LQY+TLT   I Y I  V  FM                     L   L    +
Sbjct: 924  YRSLAGALQYLTLTRPEIAYAIQQVCLFMHDPREPHLALVKRILRYIKGTLHICLHIGTA 983

Query: 610  PCTLYLHAFSDVDWARCLDTHHSAKGLCVFLSPNLISCTAKK 735
            P    L A+SD DW  C D+ HS  G CVFL  NL+S ++K+
Sbjct: 984  PVDS-LTAYSDADWVGCPDSRHSTSGYCVFLGENLVSWSSKR 1024



 Score = 55.1 bits (131), Expect(2) = 1e-17
 Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = +2

Query: 89   ADDSIVVYKTGPQLMVLLFYVDE**HCAHR*HFFV-IVFSLHSWP*V*IKDLGPLSLLFG 265
            +D S+ +YK G  +  LL YVD+    A        I   LHS     + DLG L    G
Sbjct: 810  SDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSE--FAMTDLGDLHFFLG 867

Query: 266  H*GYIHAPGLYLSQTKYTLDLIHHSNIINCKPLNITLSATSQLSAFDGSPLATP 427
                  A GL+LSQ +Y +DL+  + +  C P    + A  +LSA DG+P++ P
Sbjct: 868  ISVTRSADGLFLSQWQYAVDLLRRAGMSECHPTATPVDARCKLSATDGAPVSDP 921


>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
          Length = 1379

 Score = 62.8 bits (151), Expect(2) = 3e-17
 Identities = 37/102 (36%), Positives = 51/102 (50%)
 Frame = +1

Query: 430 YHQLIGSLQYMTLTPLGIVYDIHHVVQFMXXXXXXXXXXXXXNFTLSHTYLRFWLGFWPS 609
           Y  L+G+LQY+T+T   + + I+ V QF+                     L F L F  S
Sbjct: 565 YRSLVGALQYLTITRPNLAHSINSVSQFLHAPTEVHFQAVKRILRYVQGTLHFGLKF-TS 623

Query: 610 PCTLYLHAFSDVDWARCLDTHHSAKGLCVFLSPNLISCTAKK 735
             ++ L A+SD DWA C DT  S  G  +FL  NL+S +AKK
Sbjct: 624 CSSMGLVAYSDADWAGCPDTRRSTSGYSIFLGNNLVSWSAKK 665



 Score = 51.6 bits (122), Expect(2) = 3e-17
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
 Frame = +2

Query: 86  RADDSIVVYKTGPQLMVLLFYVDE**HCAHR*HFFV-IVFSLHSWP*V*IKDLGPLSLLF 262
           RAD S+ V+     L+ LL YVD+     +        +  LHS     +KDLGPLS   
Sbjct: 451 RADTSLFVFTKKDDLIYLLLYVDDIILTGNNPALINRFISQLHSE--FAVKDLGPLSYFL 508

Query: 263 GH*GYIHAPGLYLSQTKYTLDLIHHSNIINCKPLNITLSATSQLSAFDGSPLATP 427
           G        G +LSQ KY  D++  + +++ KP+   +  + +LS+ +G+P A P
Sbjct: 509 GLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQRLSS-EGTPFADP 562