BLASTX nr result

ID: Cimicifuga21_contig00032989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032989
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525611.1| PREDICTED: F-box/kelch-repeat protein At3g23...    73   2e-11
ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    65   4e-09
ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812...    65   6e-09
ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_003525611.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 497

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/113 (42%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
 Frame = -2

Query: 319 LPHELIIEILSWLPVKYLWPFRRVCQTWLQLIAKDPHFAELHLHRSIESNINPSILALPI 140
           LP ELI+EILSW+PVK L  FR + +TW  LI   P F +LHLHRS +   N  IL +  
Sbjct: 7   LPEELIVEILSWVPVKALMQFRCISKTWNSLIL-HPTFVKLHLHRSSK---NTHILVMYK 62

Query: 139 KPHSEKTKFYLAADYTACGQTIHLELP-------CHQGTDYYAVHGICNGLLC 2
             ++E  K  L      C     LE P       CH+    Y V G+CNGL+C
Sbjct: 63  DINAEDDK--LVTCVAPCSIRHLLENPSSTVDDGCHRFNANYLVSGVCNGLVC 113


>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
 Frame = -2

Query: 319 LPHELIIEILSWLPVKYLWPFRRVCQTWLQLIAKDPHFAELHLHRSIE-SNINPSILALP 143
           LP ++I++IL++LPVK L  F+ VC+ W QL+  DP F +LHL R+IE +NIN   L + 
Sbjct: 4   LPQDIIVDILTYLPVKSLVRFKCVCKPW-QLLISDPRFVKLHLKRAIEGNNINRQRLLVA 62

Query: 142 IKPHSEKTKFYLAADYTACGQTIHLELPC----HQGTDYYAVHGICNGLLC 2
            +P      F  A+D       + L  P      +   + ++ G C+GL+C
Sbjct: 63  AEPLYSSVDFEAASDGDGINAVMELPYPSAASRTESFAFASIRGSCDGLVC 113


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
 Frame = -2

Query: 319 LPHELIIEILSWLPVKYLWPFRRVCQTWLQLIAKDPHFAELHLHRSIE-SNINPSILALP 143
           LP E+II+ILS LPVK+L  F+ VC+TW  LI+ DP FA+LHL R ++ +N++   L L 
Sbjct: 8   LPFEIIIDILSRLPVKHLIQFKCVCRTWQYLISSDPEFAKLHLERVLQVTNVHLHRLLLS 67

Query: 142 IKP-HSEKTKFYLAADYTACGQTIHLELPCHQGTDYYAVHGICNGLL 5
             P  S   + Y  AD     +     +   +  D+  V G CNGL+
Sbjct: 68  ADPFQSVDMEAYCDADDNFLIREHRFPVRNPEDDDFEFV-GSCNGLI 113


>ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812622 [Glycine max]
          Length = 975

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/115 (40%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
 Frame = -2

Query: 319 LPHELIIEILSWLPVKYLWPFRRVCQTWLQLIAKDPHFAELHLHRSIESNINPSILALPI 140
           LP ELI+EILSWLPVK L  FR V + W  LI   P F +LHL R            LP 
Sbjct: 9   LPQELIVEILSWLPVKPLMRFRCVSKAWYSLIF-HPSFIKLHLQR------------LPK 55

Query: 139 KPHSEKT--KFYLAADYTACGQTIHLELP-------CHQGTDYYAVHGICNGLLC 2
             H   T   +     +T C     LE P       CH+   Y  V G+CNGL+C
Sbjct: 56  NTHVLLTFDNYECVTCFTPCSIRRLLENPSSTVIDGCHRFKYYNFVFGVCNGLVC 110


>ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
 Frame = -2

Query: 319 LPHELIIEILSWLPVKYLWPFRRVCQTWLQLIAKDPHFAELHLHRSIE-SNINPSILALP 143
           LP E+I++IL++LP K L  F+ VC++W  LI+ DP FA+LHL R+ E  NIN   L + 
Sbjct: 4   LPQEIIVDILTYLPAKSLIKFKCVCRSWRSLIS-DPQFAKLHLKRAHEDENINRQRLLIA 62

Query: 142 IKPHSEKTKFYLAADYTACGQTIHLELP-CHQGTDYYAVH---GICNGLLC 2
             P      F  A+D       + L  P      D +AV    G C+G++C
Sbjct: 63  ADP-LYSVDFEAASDGDNGNTLVKLSYPNAESHNDSFAVGLFLGSCDGIVC 112


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