BLASTX nr result

ID: Cimicifuga21_contig00032974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032974
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512603.1| conserved hypothetical protein [Ricinus comm...   170   2e-40
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   168   7e-40
ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   165   6e-39
ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...   164   1e-38
ref|XP_002453024.1| hypothetical protein SORBIDRAFT_04g036860 [S...   154   2e-35

>ref|XP_002512603.1| conserved hypothetical protein [Ricinus communis]
           gi|223548564|gb|EEF50055.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score =  170 bits (430), Expect = 2e-40
 Identities = 88/181 (48%), Positives = 106/181 (58%)
 Frame = +2

Query: 2   GDTPQYWKWTSYSDSRFAEVAELSCVCWLDIQGKIETRMLSQKTTYAVYLVIKFSEGAYG 181
           GDTP+YW+WTS   SRF EVAEL  VCWL+I GKI  RMLS +T YA Y V K + GAYG
Sbjct: 125 GDTPRYWRWTSELKSRFEEVAELIGVCWLEICGKISARMLSPETLYAAYFVYKTTAGAYG 184

Query: 182 LDHPPAXXXXXXXXXXXXXXXXXXXYLDPECNRRPHQQYAPQRIGLIRRRFGHILRPALS 361
            DH P                    YLD E  R+   Q   +RIGL        L+  + 
Sbjct: 185 FDHQPVEVTVGLAGTEGCKRSV---YLDAERERQQRYQIVIRRIGLFSHSRALGLQAPVP 241

Query: 362 TAARYEGQFPSERGDGWMEIEMGEFYNDEGDDGKVKMTLAEVKGGHWKSGLIVQGIELRP 541
           T    +G  P ER DGW+EIE+G F+N E DDG ++M + EV GG WK GLIVQGI++RP
Sbjct: 242 TRENNDGMHPQEREDGWLEIELGTFFNKEDDDGDLEMKVLEVNGGDWKGGLIVQGIDIRP 301

Query: 542 K 544
           K
Sbjct: 302 K 302


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  168 bits (426), Expect = 7e-40
 Identities = 87/181 (48%), Positives = 108/181 (59%)
 Frame = +2

Query: 2   GDTPQYWKWTSYSDSRFAEVAELSCVCWLDIQGKIETRMLSQKTTYAVYLVIKFSEGAYG 181
           GDTP YWKW S   SRF EVAEL  VCWL+I+GKI   MLS  T Y  YLV + + G YG
Sbjct: 125 GDTPTYWKWNSDPSSRFGEVAELISVCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYG 184

Query: 182 LDHPPAXXXXXXXXXXXXXXXXXXXYLDPECNRRPHQQYAPQRIGLIRRRFGHILRPALS 361
           LD+ P                    YLD E  RR    +  +RIGL   R   +  PA  
Sbjct: 185 LDYQPV---EVGVGLVGSECGMRNVYLDSERGRRQQYHFVSRRIGLF-NRCRIVGMPASE 240

Query: 362 TAARYEGQFPSERGDGWMEIEMGEFYNDEGDDGKVKMTLAEVKGGHWKSGLIVQGIELRP 541
            A    GQ+P +R DGW+EIE+GEF+  EG+D +++M++ EVKGG WK GLIV+GIE+RP
Sbjct: 241 PARENNGQYPKKREDGWLEIELGEFFCKEGEDRELEMSVQEVKGGDWKGGLIVEGIEIRP 300

Query: 542 K 544
           K
Sbjct: 301 K 301


>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score =  165 bits (418), Expect = 6e-39
 Identities = 90/182 (49%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
 Frame = +2

Query: 2   GDTPQYWKWTSYSDSRFAEVAELSCVCWLDIQGKIETRMLSQKTTYAVYLVIKFSEGAYG 181
           GDTP YW+W S S SRF EVAEL  VCWL+I GKI   MLS  T YA YLV K  EGAYG
Sbjct: 114 GDTPTYWRWNSDSSSRFGEVAELIGVCWLEICGKINATMLSPATLYAAYLVFKPKEGAYG 173

Query: 182 LDHPPAXXXXXXXXXXXXXXXXXXXYLDPECNRRPHQQYAPQRIGLIRR-RFGHILRPAL 358
           LD+ P                    YLD +  R        +RIGL  R R   +  P  
Sbjct: 174 LDYQPV---EVGVGLVGSENGKRNVYLDSQRGRAHRYHLVRRRIGLHNRSRIVGMQEPV- 229

Query: 359 STAARYEGQFPSERGDGWMEIEMGEFYNDEGDDGKVKMTLAEVKGGHWKSGLIVQGIELR 538
             A+   GQ P ERGDGW+EIE+GEF+  EG+DG+++M + EVK G WK GL V+GIE+R
Sbjct: 230 -PASENNGQHPKERGDGWLEIELGEFFCKEGEDGELEMRVQEVKSGDWKGGLTVEGIEIR 288

Query: 539 PK 544
           PK
Sbjct: 289 PK 290


>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
           gi|223546849|gb|EEF48346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  164 bits (416), Expect = 1e-38
 Identities = 83/182 (45%), Positives = 109/182 (59%)
 Frame = +2

Query: 5   DTPQYWKWTSYSDSRFAEVAELSCVCWLDIQGKIETRMLSQKTTYAVYLVIKFSEGAYGL 184
           DTP YW+W    DSRF EVAEL  VCWL+I  +I   MLS  T Y  Y V K + GAYG 
Sbjct: 124 DTPTYWRWICLPDSRFPEVAELISVCWLEISARINISMLSPSTLYTAYFVFKSTTGAYGF 183

Query: 185 DHPPAXXXXXXXXXXXXXXXXXXXYLDPECNRRPHQQYAPQRIGLIRRRFGHILRPALST 364
           ++ PA                   YLD E  RR   Q   +RIGL+ R     L+ +L  
Sbjct: 184 EYQPAEAVVGLVGSETCKHNV---YLDAERGRRRRSQIVRRRIGLLNRGRIFGLQASLRN 240

Query: 365 AARYEGQFPSERGDGWMEIEMGEFYNDEGDDGKVKMTLAEVKGGHWKSGLIVQGIELRPK 544
               + ++P ERGDGW+EIE+GEF+  +G+DG++++++ EVKGGHWK GL VQGIE+RPK
Sbjct: 241 GES-DCKYPKERGDGWLEIELGEFFKKKGEDGELELSVLEVKGGHWKGGLAVQGIEIRPK 299

Query: 545 AN 550
            +
Sbjct: 300 VD 301


>ref|XP_002453024.1| hypothetical protein SORBIDRAFT_04g036860 [Sorghum bicolor]
           gi|241932855|gb|EES06000.1| hypothetical protein
           SORBIDRAFT_04g036860 [Sorghum bicolor]
          Length = 302

 Score =  154 bits (388), Expect = 2e-35
 Identities = 84/182 (46%), Positives = 103/182 (56%), Gaps = 1/182 (0%)
 Frame = +2

Query: 2   GDTPQYWKWTSYSDSRFAEVAELSCVCWLDIQGKIETRMLSQKTTYAVYLVIKFSEGAYG 181
           G TPQYW+W   +DSRF E AEL  VCWL+I+GK    MLSQ TTYA Y+V K S+ +YG
Sbjct: 123 GGTPQYWRWIPLTDSRFTEGAELLNVCWLEIRGKTHCNMLSQNTTYAAYMVFKMSDESYG 182

Query: 182 LDHPPAXXXXXXXXXXXXXXXXXXXYLDPECNRRPHQQYAPQR-IGLIRRRFGHILRPAL 358
           LD P                       + E      Q Y   R IGL R R G   R   
Sbjct: 183 LDDPLQEAEVSIGATKSTRRVCLGYDNEDEDGEEVPQNYRSFRPIGLFRPRVG---RRNR 239

Query: 359 STAARYEGQFPSERGDGWMEIEMGEFYNDEGDDGKVKMTLAEVKGGHWKSGLIVQGIELR 538
                 + Q P  R DGWME+EMGEF N+EG+DG+V ++L E +GG+WK GLI+QGIE+R
Sbjct: 240 RVPPGVQVQRPQARADGWMEMEMGEFKNEEGEDGEVSISLLETRGGNWKKGLILQGIEIR 299

Query: 539 PK 544
            K
Sbjct: 300 VK 301


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