BLASTX nr result

ID: Cimicifuga21_contig00032969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032969
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31844.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002274961.1| PREDICTED: traB domain-containing protein-li...    70   1e-10
emb|CAN73376.1| hypothetical protein VITISV_019101 [Vitis vinifera]    70   1e-10
ref|XP_002510844.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_003536482.1| PREDICTED: traB domain-containing protein-li...    67   2e-09

>emb|CBI31844.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/80 (47%), Positives = 55/80 (68%)
 Frame = -1

Query: 240 MKTLTSSFPLFLSKNPLPPFVSFKSLPTFPKTLATKNPTVAIKPPPPEFDFRSEISKDSR 61
           M+TL S+FP+F +    P F + K  P+ P  ++     V+IKPPPP+FDFR++I +DSR
Sbjct: 1   METLASTFPIFTAN---PNFHTTK--PSKPSKVS-----VSIKPPPPDFDFRAQILEDSR 50

Query: 60  ISIENSHPELMDLVKNGSLV 1
            +I  +HP+L+DL  NGSLV
Sbjct: 51  ATIAQTHPQLLDLADNGSLV 70


>ref|XP_002274961.1| PREDICTED: traB domain-containing protein-like [Vitis vinifera]
          Length = 385

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/80 (47%), Positives = 55/80 (68%)
 Frame = -1

Query: 240 MKTLTSSFPLFLSKNPLPPFVSFKSLPTFPKTLATKNPTVAIKPPPPEFDFRSEISKDSR 61
           M+TL S+FP+F +    P F + K  P+ P  ++     V+IKPPPP+FDFR++I +DSR
Sbjct: 1   METLASTFPIFTAN---PNFHTTK--PSKPSKVS-----VSIKPPPPDFDFRAQILEDSR 50

Query: 60  ISIENSHPELMDLVKNGSLV 1
            +I  +HP+L+DL  NGSLV
Sbjct: 51  ATIAQTHPQLLDLADNGSLV 70


>emb|CAN73376.1| hypothetical protein VITISV_019101 [Vitis vinifera]
          Length = 364

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/80 (47%), Positives = 55/80 (68%)
 Frame = -1

Query: 240 MKTLTSSFPLFLSKNPLPPFVSFKSLPTFPKTLATKNPTVAIKPPPPEFDFRSEISKDSR 61
           M+TL S+FP+F +    P F + K  P+ P  ++     V+IKPPPP+FDFR++I +DSR
Sbjct: 1   METLASTFPIFTAN---PNFHTTK--PSKPSKVS-----VSIKPPPPDFDFRAQILEDSR 50

Query: 60  ISIENSHPELMDLVKNGSLV 1
            +I  +HP+L+DL  NGSLV
Sbjct: 51  ATIAQTHPQLLDLADNGSLV 70


>ref|XP_002510844.1| conserved hypothetical protein [Ricinus communis]
           gi|223549959|gb|EEF51446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 390

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = -1

Query: 183 FVSFKSLPTFPKTLATKNPTVAIKPPPPEFDFRSEISKDSRISIENSHPELMDLVKNGSL 4
           F  F   P FP +   K   V+IKPPPP+FDFRSEI ++SR +I  +HP+L+DL  +G+L
Sbjct: 9   FPIFSKYPNFPISKPAKPLKVSIKPPPPDFDFRSEILQESRTTIAKNHPDLLDLADSGNL 68

Query: 3   V 1
           +
Sbjct: 69  I 69


>ref|XP_003536482.1| PREDICTED: traB domain-containing protein-like [Glycine max]
          Length = 371

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/77 (44%), Positives = 46/77 (59%)
 Frame = -1

Query: 231 LTSSFPLFLSKNPLPPFVSFKSLPTFPKTLATKNPTVAIKPPPPEFDFRSEISKDSRISI 52
           +T++ P  LS  PL P +                  V++KPPPP+FD+R EIS++SR +I
Sbjct: 1   MTNNAPFSLSTRPLRPILK-----------------VSVKPPPPDFDYRREISEESRAAI 43

Query: 51  ENSHPELMDLVKNGSLV 1
             SHPEL+DL  NGSLV
Sbjct: 44  AESHPELLDLADNGSLV 60


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