BLASTX nr result

ID: Cimicifuga21_contig00032968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032968
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera]     55   4e-06
emb|CAN83518.1| hypothetical protein VITISV_035077 [Vitis vinifera]    55   8e-06
emb|CAN79605.1| hypothetical protein VITISV_011118 [Vitis vinifera]    54   1e-05

>ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera]
          Length = 937

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = -2

Query: 298 HQGEVGDRAYVACLMVHPAIIEEIIRLQPQDQTLIKILAALVESDLDGLPSEWPVSSLAD 119
           H   +   A VA   V P ++  I  LQ  D  L++++  + +          P   L+D
Sbjct: 55  HMRVLDSGALVANFRVQPNLVGRIKALQKNDLNLVQLMEEVKKGSK-------PDFVLSD 107

Query: 118 LGHQRLQFQGR-CVPRDADLRRWILDEAHCSKQSVHPGG 5
            G   L+F  R CVP D DLRR  L+EAHCS+ ++HPGG
Sbjct: 108 DGI--LRFMTRLCVPNDGDLRREFLEEAHCSRLAIHPGG 144


>emb|CAN83518.1| hypothetical protein VITISV_035077 [Vitis vinifera]
          Length = 1194

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/98 (33%), Positives = 51/98 (52%)
 Frame = -2

Query: 298  HQGEVGDRAYVACLMVHPAIIEEIIRLQPQDQTLIKILAALVESDLDGLPSEWPVSSLAD 119
            H   +   A VA   V P ++  I  LQ +D  L++++  +   +        P   L D
Sbjct: 765  HMRFLDSGALVANFKVQPDLVGRIKALQKKDLNLVQLMEEVKNGNK-------PDFVLLD 817

Query: 118  LGHQRLQFQGRCVPRDADLRRWILDEAHCSKQSVHPGG 5
             G  R + +  CVP D DL+R +L+EAHCS+ ++HPGG
Sbjct: 818  DGILRFRVR-LCVPNDGDLKRELLEEAHCSRLAIHPGG 854


>emb|CAN79605.1| hypothetical protein VITISV_011118 [Vitis vinifera]
          Length = 784

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -2

Query: 277 RAYVACLMVHPAIIEEIIRLQPQDQTLIKILAALVESDLDGLPSEWPVSSLADLGHQRLQ 98
           RA VA   V P ++  I  LQ  D  L++++  + +S         P   L+D G   L+
Sbjct: 365 RALVANFRVQPNLVGRIKALQKNDLNLVQLMEEVKKSSK-------PDFVLSDDGI--LR 415

Query: 97  FQGR-CVPRDADLRRWILDEAHCSKQSVHPGG 5
           F+ R CV  D DLR+ +L+EAHCS+ ++HPGG
Sbjct: 416 FRTRICVLNDGDLRKELLEEAHCSRLTIHPGG 447


Top