BLASTX nr result

ID: Cimicifuga21_contig00032960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032960
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270770.2| PREDICTED: uncharacterized protein LOC100263...   108   3e-22
emb|CBI25524.3| unnamed protein product [Vitis vinifera]              108   3e-22
gb|AAG51222.1|AC051630_19 unknown protein; 33246-28649 [Arabidop...    96   4e-18
ref|NP_174606.2| tetratricopeptide repeat-containing protein [Ar...    96   4e-18
dbj|BAC42319.1| unknown protein [Arabidopsis thaliana]                 96   4e-18

>ref|XP_002270770.2| PREDICTED: uncharacterized protein LOC100263830 [Vitis vinifera]
          Length = 799

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/92 (56%), Positives = 68/92 (73%)
 Frame = +1

Query: 94  IPSNLRQMISQSTPEDLPSTCSSLLDFFLSMPLFHHVVEELTDPQRSLLSKNTETALDLK 273
           +P  L++MI++STP+DLPSTC SLL+FFL M  F  +V +L   + +L  KN + AL+ K
Sbjct: 8   VPDALKRMIAESTPDDLPSTCYSLLEFFLHMQQFQMIVGDLAHSETALCRKNRDAALESK 67

Query: 274 RKGNDCFTSGDYDKASSFYTQALRFAPTDYAD 369
           RKGN+CF+SGDY KA S Y+QALR APTD  D
Sbjct: 68  RKGNECFSSGDYMKALSLYSQALRVAPTDADD 99


>emb|CBI25524.3| unnamed protein product [Vitis vinifera]
          Length = 716

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/92 (56%), Positives = 68/92 (73%)
 Frame = +1

Query: 94  IPSNLRQMISQSTPEDLPSTCSSLLDFFLSMPLFHHVVEELTDPQRSLLSKNTETALDLK 273
           +P  L++MI++STP+DLPSTC SLL+FFL M  F  +V +L   + +L  KN + AL+ K
Sbjct: 8   VPDALKRMIAESTPDDLPSTCYSLLEFFLHMQQFQMIVGDLAHSETALCRKNRDAALESK 67

Query: 274 RKGNDCFTSGDYDKASSFYTQALRFAPTDYAD 369
           RKGN+CF+SGDY KA S Y+QALR APTD  D
Sbjct: 68  RKGNECFSSGDYMKALSLYSQALRVAPTDADD 99


>gb|AAG51222.1|AC051630_19 unknown protein; 33246-28649 [Arabidopsis thaliana]
          Length = 781

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/92 (51%), Positives = 60/92 (65%)
 Frame = +1

Query: 94  IPSNLRQMISQSTPEDLPSTCSSLLDFFLSMPLFHHVVEELTDPQRSLLSKNTETALDLK 273
           IP +L Q +  S+ +DL ST SSLL  FL +P FH  V EL +P+     KN ET+LDLK
Sbjct: 8   IPEDLLQTVKSSSVDDLLSTSSSLLRLFLGLPQFHQAVSELANPELGCCGKNEETSLDLK 67

Query: 274 RKGNDCFTSGDYDKASSFYTQALRFAPTDYAD 369
           R+GN CF S D+D+A   Y++ALR AP D  D
Sbjct: 68  RRGNHCFRSRDFDEALRLYSKALRVAPLDAID 99


>ref|NP_174606.2| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332193468|gb|AEE31589.1| tetratricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/92 (51%), Positives = 60/92 (65%)
 Frame = +1

Query: 94  IPSNLRQMISQSTPEDLPSTCSSLLDFFLSMPLFHHVVEELTDPQRSLLSKNTETALDLK 273
           IP +L Q +  S+ +DL ST SSLL  FL +P FH  V EL +P+     KN ET+LDLK
Sbjct: 8   IPEDLLQTVKSSSVDDLLSTSSSLLRLFLGLPQFHQAVSELANPELGCCGKNEETSLDLK 67

Query: 274 RKGNDCFTSGDYDKASSFYTQALRFAPTDYAD 369
           R+GN CF S D+D+A   Y++ALR AP D  D
Sbjct: 68  RRGNHCFRSRDFDEALRLYSKALRVAPLDAID 99


>dbj|BAC42319.1| unknown protein [Arabidopsis thaliana]
          Length = 604

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/92 (51%), Positives = 60/92 (65%)
 Frame = +1

Query: 94  IPSNLRQMISQSTPEDLPSTCSSLLDFFLSMPLFHHVVEELTDPQRSLLSKNTETALDLK 273
           IP +L Q +  S+ +DL ST SSLL  FL +P FH  V EL +P+     KN ET+LDLK
Sbjct: 8   IPEDLLQTVKSSSVDDLLSTSSSLLRLFLGLPQFHQAVSELANPELGCCGKNEETSLDLK 67

Query: 274 RKGNDCFTSGDYDKASSFYTQALRFAPTDYAD 369
           R+GN CF S D+D+A   Y++ALR AP D  D
Sbjct: 68  RRGNHCFRSRDFDEALRLYSKALRVAPLDAID 99


Top