BLASTX nr result

ID: Cimicifuga21_contig00032952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032952
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40980.3| unnamed protein product [Vitis vinifera]               83   4e-14
ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus c...    79   5e-13
ref|XP_003548909.1| PREDICTED: uncharacterized protein LOC100818...    72   8e-11
ref|XP_004142023.1| PREDICTED: uncharacterized protein LOC101222...    68   9e-10
ref|XP_002877744.1| hypothetical protein ARALYDRAFT_485391 [Arab...    66   4e-09

>emb|CBI40980.3| unnamed protein product [Vitis vinifera]
          Length = 2083

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/84 (46%), Positives = 55/84 (65%)
 Frame = -3

Query: 494 HQLLINIALGEIVMAEYSSKNVLIGAHQQRKLLSSLCIGREHRSISWTIEGGLIIVETTA 315
           H LLINI++ EI +   + KNVL GAHQ  KLLSSL +G E ++ISW ++GG + +ETTA
Sbjct: 69  HWLLINISVSEIFLVRSTVKNVLAGAHQMNKLLSSLSVGGEFQTISWAVQGGFVFLETTA 128

Query: 314 LAMFIRCFSAYLRWIQTASSILPS 243
           +     CF++Y   I    S++ S
Sbjct: 129 VVKIFHCFASYACCITDLLSVMSS 152


>ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus communis]
            gi|223538452|gb|EEF40058.1| hypothetical protein
            RCOM_0603630 [Ricinus communis]
          Length = 1720

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 39/102 (38%), Positives = 62/102 (60%)
 Frame = -3

Query: 548  SNQRVRWMSSNLRLPSSGHQLLINIALGEIVMAEYSSKNVLIGAHQQRKLLSSLCIGREH 369
            SN    + +  +  P+S  ++LI + +G I +A +  KN+++GAHQ  KL S   +    
Sbjct: 1119 SNVPSEFENLGISTPTSSPRILIGVTIGGIFVARHKVKNIVVGAHQFSKLTSWFSVEGNL 1178

Query: 368  RSISWTIEGGLIIVETTALAMFIRCFSAYLRWIQTASSILPS 243
            ++ISW I+GG + +ETTAL MF+RCFS+Y++      SI  S
Sbjct: 1179 KTISWRIQGGHLFLETTALRMFVRCFSSYIQRFTDILSITKS 1220


>ref|XP_003548909.1| PREDICTED: uncharacterized protein LOC100818143 [Glycine max]
          Length = 3602

 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
 Frame = -3

Query: 557  SCDSNQRVRWMSS--NLRLPSSG-HQLLINIALGEIVMAEYSSKNVLIGAHQQRKLLSSL 387
            S  S+Q V  M S  N+ +P+S  H LLI++A+  I +   S K+ LI AH+  KL S L
Sbjct: 1158 SNQSSQSVIKMGSPTNISMPASASHWLLIDVAITNIFIGRCSLKSDLIEAHKLNKLHSLL 1217

Query: 386  CIGREHRSISWTIEGGLIIVETTALAMFIRCFSAYLRWIQTASS 255
             IG E   ISW ++GG I +ETT+LAM I  +S+YL  I   +S
Sbjct: 1218 SIGGEFHMISWKVQGGFIFLETTSLAMAIDNYSSYLHCIGNLTS 1261


>ref|XP_004142023.1| PREDICTED: uncharacterized protein LOC101222087 [Cucumis sativus]
          Length = 3608

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 37/88 (42%), Positives = 52/88 (59%)
 Frame = -3

Query: 500  SGHQLLINIALGEIVMAEYSSKNVLIGAHQQRKLLSSLCIGREHRSISWTIEGGLIIVET 321
            S  QLL+NIA+  I++   S  ++LI AHQ  KL S L +G + R   W I+GG++ +ET
Sbjct: 1444 SKFQLLVNIAISRILITRCSVYDILIEAHQLSKLSSDLSVGEDFR---WKIQGGVLFLET 1500

Query: 320  TALAMFIRCFSAYLRWIQTASSILPSGD 237
             +LA FI CF  Y   I +  S+L   D
Sbjct: 1501 LSLAFFINCFHKYYHAIGSLLSLLQFSD 1528


>ref|XP_002877744.1| hypothetical protein ARALYDRAFT_485391 [Arabidopsis lyrata subsp.
            lyrata] gi|297323582|gb|EFH54003.1| hypothetical protein
            ARALYDRAFT_485391 [Arabidopsis lyrata subsp. lyrata]
          Length = 3074

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 34/93 (36%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
 Frame = -3

Query: 524  SSNLRLPSSGHQLL-INIALGEIVMAEYSSKNVLIGAHQQRKLLSSLCIGREHRSISWTI 348
            S++  LPS+  + + IN+AL ++ +A  S+KNVL+   +    ++S+CIGR+ +SIS ++
Sbjct: 1087 SASDSLPSNSTRWIHINLALTDLFVARGSTKNVLVEVRRSSNFVTSVCIGRKFQSISCSV 1146

Query: 347  EGGLIIVETTALAMFIRCFSAYLRWIQTASSIL 249
            EGGL ++E   L + I  +S YL +I +  S++
Sbjct: 1147 EGGLFVLEPKTLIVLIHGYSTYLYFISSKVSVI 1179


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