BLASTX nr result

ID: Cimicifuga21_contig00032949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032949
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...   108   3e-22
emb|CBI18302.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun...   107   8e-22
gb|AAB03077.1| tRNA nucleotidyltransferase [Lupinus albus]            104   9e-21

>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/88 (67%), Positives = 64/88 (72%)
 Frame = -1

Query: 266 VKEYLLGIGAVGNHDFNVIACNPDQSKHLETARMHLFGASVDFTNLRSEVYCADSRIPTM 87
           V+EYLL  G    H   VI  NPDQSKHLETARM L    +DF NLRSE Y  +SRIPTM
Sbjct: 81  VREYLLSTGEEA-HGVGVIPRNPDQSKHLETARMRLLDLWIDFVNLRSEDYSENSRIPTM 139

Query: 86  MFGSAKNDAERRDLTINSLFYNIHTDSV 3
            FG+AK DA RRDLTINSLFYNI+T SV
Sbjct: 140 TFGTAKEDAYRRDLTINSLFYNINTSSV 167


>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
           vinifera]
          Length = 564

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/71 (76%), Positives = 58/71 (81%)
 Frame = -1

Query: 215 VIACNPDQSKHLETARMHLFGASVDFTNLRSEVYCADSRIPTMMFGSAKNDAERRDLTIN 36
           VI CNPDQSKHLETARM LF   +DF NLRSE Y  +SRIPTM FG+AK DA RRDLTIN
Sbjct: 136 VIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSENSRIPTMRFGTAKEDAYRRDLTIN 195

Query: 35  SLFYNIHTDSV 3
           SLFYNI+T SV
Sbjct: 196 SLFYNINTSSV 206


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/71 (76%), Positives = 58/71 (81%)
 Frame = -1

Query: 215 VIACNPDQSKHLETARMHLFGASVDFTNLRSEVYCADSRIPTMMFGSAKNDAERRDLTIN 36
           VI CNPDQSKHLETARM LF   +DF NLRSE Y  +SRIPTM FG+AK DA RRDLTIN
Sbjct: 91  VIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSENSRIPTMRFGTAKEDAYRRDLTIN 150

Query: 35  SLFYNIHTDSV 3
           SLFYNI+T SV
Sbjct: 151 SLFYNINTSSV 161


>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 577

 Score =  107 bits (268), Expect = 8e-22
 Identities = 59/89 (66%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
 Frame = -1

Query: 266 VKEYLLGIGA-VGNHDFNVIACNPDQSKHLETARMHLFGASVDFTNLRSEVYCADSRIPT 90
           V+EYLL  G  VG     +I  NPDQSKHLETARM LF   +DF NLR E Y  DSRIPT
Sbjct: 131 VREYLLSTGEEVGG--LGIIPRNPDQSKHLETARMRLFDLWIDFVNLRCEDYTEDSRIPT 188

Query: 89  MMFGSAKNDAERRDLTINSLFYNIHTDSV 3
           M FG+A+ DA RRDLTINSLFYNI+T SV
Sbjct: 189 MKFGTAEEDAFRRDLTINSLFYNINTSSV 217


>gb|AAB03077.1| tRNA nucleotidyltransferase [Lupinus albus]
          Length = 560

 Score =  104 bits (259), Expect = 9e-21
 Identities = 58/89 (65%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
 Frame = -1

Query: 266 VKEYLLGIGAVGNHDFNVIACNPDQSKHLETARMHLFGASVDFTNLRSEVYCADSRIPTM 87
           V+EYLL IG        VI  NPDQSKHLETARM LF   +DF NLRSE Y  +SRIP+M
Sbjct: 128 VREYLLSIGEEAQ-GVCVIESNPDQSKHLETARMRLFDMWIDFVNLRSEEYTDNSRIPSM 186

Query: 86  M-FGSAKNDAERRDLTINSLFYNIHTDSV 3
             FG+ + DA RRDLTINSLFYNI+TDSV
Sbjct: 187 QRFGTPEEDAYRRDLTINSLFYNINTDSV 215


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