BLASTX nr result

ID: Cimicifuga21_contig00032924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032924
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   104   6e-21
emb|CCH50966.1| T4.5 [Malus x robusta]                                101   7e-20
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]    96   2e-18
ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
emb|CBI31290.3| unnamed protein product [Vitis vinifera]               94   9e-18

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  104 bits (260), Expect = 6e-21
 Identities = 55/125 (44%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
 Frame = +3

Query: 3   DLLEFVDGSTPCPSKLISVTDSSGELSTQINPKYVEWVKQDQLLLVWIQATIS*EILPYI 182
           DL+ F+DG+  CP K  +        S  +NP YV W K+D  LL WI A++S +++  I
Sbjct: 46  DLMGFIDGTEACPPKHTA--------SGSLNPAYVVWQKKDVCLLGWILASLSEKLVSTI 97

Query: 183 VGLQSSKELWTTLEQRFASISR---SHVKSRLQTLRKGDLTLTEYLQQIKQICDSLVAAG 353
            GL++SK++WT L+ RF+S SR   SH+K +LQTL +G  + +EYL+  K + D L AAG
Sbjct: 98  YGLETSKQVWTALQTRFSSQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAG 157

Query: 354 SPVDE 368
            PVD+
Sbjct: 158 KPVDD 162


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/125 (39%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
 Frame = +3

Query: 6   LLEFVDGSTPCPSKLISVTDSSGELSTQINPKYVEWVKQDQLLLVWIQATIS*EILPYIV 185
           L+  V+G   CP     V D SG      N  +  W ++DQ+L++WI +T+S ++LP  +
Sbjct: 299 LIGLVNGEDLCPPPF--VRDPSGTCVP--NASFETWCERDQILMIWINSTLSKDLLPLTI 354

Query: 186 GLQSSKELWTTLEQRFASISRSHV---KSRLQTLRKGDLTLTEYLQQIKQICDSLVAAGS 356
           G++ S+ LW +LE+RF+  SR+HV   +S++QT+ KGD ++T++L  IK+I + L AAG 
Sbjct: 355 GMEDSRSLWQSLERRFSGASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAGE 414

Query: 357 PVDET 371
           P+ E+
Sbjct: 415 PLSES 419


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/130 (36%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
 Frame = +3

Query: 12  EFVDGSTPCPSKLISVTDSSGELSTQINPKYVEWVKQDQLLLVWIQATIS*EILPYIVGL 191
           + ++G  PCP K IS        + ++NP ++ W + D+++L WI ++++ E++  IVGL
Sbjct: 56  DHIEGLRPCPPKTIS--------TGEVNPDFLVWRRYDRMILSWIYSSLTPEVMGQIVGL 107

Query: 192 QSSKELWTTLEQRFASISRS---HVKSRLQTLRKGDLTLTEYLQQIKQICDSLVAAGSPV 362
           Q+S E WT L++ F++ +++    ++   QT +KG LT+ EY+Q++K I DSL A G PV
Sbjct: 108 QTSHEAWTALQRSFSASTKARTMQLRLAFQTTKKGSLTMMEYIQKLKHISDSLAAIGEPV 167

Query: 363 DETKSIWKRL 392
            E   I + L
Sbjct: 168 PEKDQILQLL 177


>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/129 (34%), Positives = 84/129 (65%), Gaps = 3/129 (2%)
 Frame = +3

Query: 3   DLLEFVDGSTPCPSKLISVTDSSGELSTQINPKYVEWVKQDQLLLVWIQATIS*EILPYI 182
           +L+ FV G+ PCP +  S TD  G ++T+++P+Y  W +QDQ++L WI  ++S  +L  +
Sbjct: 43  NLMGFVTGTNPCPPEFKSNTD--GTITTEVDPRYATWHQQDQMILSWINNSLSPTVLSTV 100

Query: 183 VGLQSSKELWTTLEQRFASISRSHV---KSRLQTLRKGDLTLTEYLQQIKQICDSLVAAG 353
               SS+  W++LE+R+AS S++ +   +  L T++   L++++++ +I QI D+L  AG
Sbjct: 101 ARFTSSQATWSSLEKRYASQSKNRILQLRHDLLTVKGEGLSISDFVDKINQIADNLALAG 160

Query: 354 SPVDETKSI 380
            PVD+ + +
Sbjct: 161 KPVDDDELV 169


>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/130 (35%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
 Frame = +3

Query: 12  EFVDGSTPCPSKLISVTDSSGELSTQINPKYVEWVKQDQLLLVWIQATIS*EILPYIVGL 191
           + ++G  PCP K IS        + ++NP ++ W + D+++L WI ++++ +++  IVGL
Sbjct: 156 DHIEGLRPCPPKTIS--------TGEVNPDFLVWRRYDRMILSWIYSSLTPDVMGQIVGL 207

Query: 192 QSSKELWTTLEQRFASISRS---HVKSRLQTLRKGDLTLTEYLQQIKQICDSLVAAGSPV 362
           Q+S E WT L++ F++ +++    ++   QT +KG LT+ EY+Q++K I DSL A G PV
Sbjct: 208 QTSHEAWTALQRSFSASTKARTMQLRLAFQTNKKGSLTMMEYIQKLKHISDSLAAIGEPV 267

Query: 363 DETKSIWKRL 392
            E   I + L
Sbjct: 268 PEKDQILQLL 277


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