BLASTX nr result

ID: Cimicifuga21_contig00032919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032919
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239777.1| omega-3 fatty acid desaturase, chloroplastic...   128   4e-28
ref|XP_004148182.1| PREDICTED: omega-3 fatty acid desaturase, ch...   128   4e-28
gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var....   127   7e-28
gb|AFX68461.1| chloroplast omega-3 fatty acid desaturase [Olea e...   126   2e-27
gb|ADZ39686.1| chloroplast omega-3 fatty acid desaturase [Olea e...   126   2e-27

>ref|NP_001239777.1| omega-3 fatty acid desaturase, chloroplastic-like [Glycine max]
           gi|255634917|gb|ACU17817.1| unknown [Glycine max]
           gi|332183197|gb|AEE25912.1| chloroplast fatty acid
           desaturase 8 [Glycine max]
          Length = 453

 Score =  128 bits (322), Expect = 4e-28
 Identities = 55/69 (79%), Positives = 60/69 (86%)
 Frame = -1

Query: 208 FDPSAPPPFKIADIRAAVPKHCWVKDPWKSMSYVVRDIVAVFVLGALATYFDNVGVWALY 29
           FDPSAPPPFK+ADIRAA+PKHCWVKDPWKSMSYVVRD++ VF L A A Y +N  VW LY
Sbjct: 97  FDPSAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVIVVFGLAAAAAYLNNWVVWPLY 156

Query: 28  WAAQGTMFW 2
           WAAQGTMFW
Sbjct: 157 WAAQGTMFW 165


>ref|XP_004148182.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like
           [Cucumis sativus] gi|449507795|ref|XP_004163131.1|
           PREDICTED: omega-3 fatty acid desaturase,
           chloroplastic-like [Cucumis sativus]
           gi|190613766|gb|ACE80931.1| omega-3 fatty acid
           desaturase [Cucumis sativus]
          Length = 445

 Score =  128 bits (322), Expect = 4e-28
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = -1

Query: 220 DEHGFDPSAPPPFKIADIRAAVPKHCWVKDPWKSMSYVVRDIVAVFVLGALATYFDNVGV 41
           DE  FDP+APPPF++ADIRAA+PKHCWV+DPW+SMSYVVRD+V VF L A+A YF+N  V
Sbjct: 91  DEGSFDPAAPPPFRLADIRAAIPKHCWVRDPWRSMSYVVRDVVVVFGLAAVAAYFNNWVV 150

Query: 40  WALYWAAQGTMFW 2
           W LYW AQGTMFW
Sbjct: 151 WPLYWFAQGTMFW 163


>gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var. sarcodactylis]
          Length = 457

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/76 (72%), Positives = 62/76 (81%)
 Frame = -1

Query: 229 DDNDEHGFDPSAPPPFKIADIRAAVPKHCWVKDPWKSMSYVVRDIVAVFVLGALATYFDN 50
           ++ +   FDP APPPFK+ADIRAA+PKHCWVKDPWKSMSYVVRD+V VF L A A Y +N
Sbjct: 94  EEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNN 153

Query: 49  VGVWALYWAAQGTMFW 2
             VW LYWAAQGTMFW
Sbjct: 154 WVVWPLYWAAQGTMFW 169


>gb|AFX68461.1| chloroplast omega-3 fatty acid desaturase [Olea europaea]
          Length = 436

 Score =  126 bits (317), Expect = 2e-27
 Identities = 53/74 (71%), Positives = 61/74 (82%)
 Frame = -1

Query: 223 NDEHGFDPSAPPPFKIADIRAAVPKHCWVKDPWKSMSYVVRDIVAVFVLGALATYFDNVG 44
           N +  FDP APPPFK++DI+AA+PKHCWVKDPWKSMSYVVRD+V VF L A+A YF+N  
Sbjct: 82  NGDESFDPGAPPPFKLSDIKAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAVAAYFNNWV 141

Query: 43  VWALYWAAQGTMFW 2
            W LYW AQGTMFW
Sbjct: 142 FWPLYWFAQGTMFW 155


>gb|ADZ39686.1| chloroplast omega-3 fatty acid desaturase [Olea europaea subsp.
           europaea]
          Length = 401

 Score =  126 bits (317), Expect = 2e-27
 Identities = 53/74 (71%), Positives = 61/74 (82%)
 Frame = -1

Query: 223 NDEHGFDPSAPPPFKIADIRAAVPKHCWVKDPWKSMSYVVRDIVAVFVLGALATYFDNVG 44
           N +  FDP APPPFK++DI+AA+PKHCWVKDPWKSMSYVVRD+V VF L A+A YF+N  
Sbjct: 82  NGDESFDPGAPPPFKLSDIKAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAVAAYFNNWV 141

Query: 43  VWALYWAAQGTMFW 2
            W LYW AQGTMFW
Sbjct: 142 FWPLYWFAQGTMFW 155


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