BLASTX nr result
ID: Cimicifuga21_contig00032895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032895 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307793.1| cholesterol transport protein [Populus trich... 74 9e-12 emb|CBI37746.3| unnamed protein product [Vitis vinifera] 74 1e-11 emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera] 74 1e-11 ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit... 72 4e-11 ref|XP_003519693.1| PREDICTED: niemann-Pick C1 protein-like [Gly... 71 8e-11 >ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa] gi|222857242|gb|EEE94789.1| cholesterol transport protein [Populus trichocarpa] Length = 1274 Score = 74.3 bits (181), Expect = 9e-12 Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 4/57 (7%) Frame = +3 Query: 120 ERSNSQLLLSSDATT----SGEYCAMYDICGKRSDGKALNCPFGSQSVKPGELLSSK 278 ERS+++LLL+ +A + S EYCAMYDICG R DGK LNCP+GS SVKP +LLS K Sbjct: 14 ERSDTRLLLTRNAVSRERHSEEYCAMYDICGAREDGKVLNCPYGSPSVKPDDLLSQK 70 >emb|CBI37746.3| unnamed protein product [Vitis vinifera] Length = 2090 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/57 (61%), Positives = 45/57 (78%), Gaps = 4/57 (7%) Frame = +3 Query: 120 ERSNSQLLLSSDATT----SGEYCAMYDICGKRSDGKALNCPFGSQSVKPGELLSSK 278 E+++SQ LL +AT+ S EYCAMYDICG+RSDGK LNCP+G+ +VKP E LS+K Sbjct: 832 EKTDSQFLLFPNATSGERHSPEYCAMYDICGERSDGKVLNCPYGTPAVKPDEFLSAK 888 >emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera] Length = 1007 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/57 (61%), Positives = 45/57 (78%), Gaps = 4/57 (7%) Frame = +3 Query: 120 ERSNSQLLLSSDATT----SGEYCAMYDICGKRSDGKALNCPFGSQSVKPGELLSSK 278 E+++SQ LL +AT+ S EYCAMYDICG+RSDGK LNCP+G+ +VKP E LS+K Sbjct: 846 EKTDSQFLLFPNATSGERHSPEYCAMYDICGERSDGKVLNCPYGTPAVKPDEFLSAK 902 >ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera] Length = 1309 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/44 (75%), Positives = 36/44 (81%) Frame = +3 Query: 147 SSDATTSGEYCAMYDICGKRSDGKALNCPFGSQSVKPGELLSSK 278 S+ S EYCAMYDICGKRSDGK LNCP+GS SVKP +LLSSK Sbjct: 56 SASERHSEEYCAMYDICGKRSDGKVLNCPYGSPSVKPDDLLSSK 99 >ref|XP_003519693.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max] Length = 1268 Score = 71.2 bits (173), Expect = 8e-11 Identities = 32/41 (78%), Positives = 36/41 (87%) Frame = +3 Query: 156 ATTSGEYCAMYDICGKRSDGKALNCPFGSQSVKPGELLSSK 278 A S EYCAMYDICG+RSDGKALNCP+GS SVKP +LLS+K Sbjct: 30 AKHSEEYCAMYDICGQRSDGKALNCPYGSPSVKPDDLLSAK 70