BLASTX nr result

ID: Cimicifuga21_contig00032887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032887
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|...   104   7e-21
ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin ...   101   6e-20
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...   101   6e-20

>ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|222860719|gb|EEE98266.1|
            predicted protein [Populus trichocarpa]
          Length = 1007

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/73 (61%), Positives = 62/73 (84%)
 Frame = +3

Query: 3    NKPAEVTLLNVTCFDKKTRQRYTEGPNVEKYKQILVKNAKEKGAESVSYDPVTGEWKFRV 182
            NKPAEVTLLN+ CFDKKT +++TEGP +EKYK++L + A+++GAE VSYDPV GEWKF+V
Sbjct: 925  NKPAEVTLLNIKCFDKKTGRQFTEGPKIEKYKEMLKRKAEDQGAEFVSYDPVKGEWKFKV 984

Query: 183  NNLNVYSEEDDQE 221
            N+ + Y  E+++E
Sbjct: 985  NHFSKYMLEEEEE 997


>ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|223541944|gb|EEF43490.1|
            transporter, putative [Ricinus communis]
          Length = 957

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/75 (64%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3    NKPAEVTLLNVTCFDKKTRQRYTEGPNVEKYKQILVKNAKEKGAESVSYDPVTGEWKFRV 182
            NKPAEVTLLN+ CFDKKT ++YTEG  +EKYK++L + A+E+GAE VSYDPV GEWKFRV
Sbjct: 868  NKPAEVTLLNIKCFDKKTGRQYTEGAKIEKYKEMLKRKAEEQGAEFVSYDPVKGEWKFRV 927

Query: 183  NNLNVY--SEEDDQE 221
            N+ + Y   EE+++E
Sbjct: 928  NHFSKYGMGEEEEEE 942


>ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|222846239|gb|EEE83786.1|
            predicted protein [Populus trichocarpa]
          Length = 942

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/73 (60%), Positives = 60/73 (82%)
 Frame = +3

Query: 3    NKPAEVTLLNVTCFDKKTRQRYTEGPNVEKYKQILVKNAKEKGAESVSYDPVTGEWKFRV 182
            NKPAEVTLLN+ C DKKT +++TEGP +E+YK++L + A+++GAE VSYDPV GEWKF+V
Sbjct: 849  NKPAEVTLLNIKCIDKKTGRQFTEGPKIERYKEMLKRKAEDQGAEFVSYDPVKGEWKFKV 908

Query: 183  NNLNVYSEEDDQE 221
            N+ + Y  ED+ E
Sbjct: 909  NHFSKYMLEDEGE 921


>ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin NUP145-like [Cucumis
           sativus]
          Length = 362

 Score =  101 bits (252), Expect = 6e-20
 Identities = 45/73 (61%), Positives = 58/73 (79%)
 Frame = +3

Query: 3   NKPAEVTLLNVTCFDKKTRQRYTEGPNVEKYKQILVKNAKEKGAESVSYDPVTGEWKFRV 182
           NKPAEVT+LN+ C DK+T  +YTEGP VEKYK++L K  + +GAE VSYDPV GEWKFRV
Sbjct: 285 NKPAEVTILNIKCVDKQTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSYDPVKGEWKFRV 344

Query: 183 NNLNVYSEEDDQE 221
            + + Y+ ED++E
Sbjct: 345 EHFSKYNMEDNEE 357


>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score =  101 bits (252), Expect = 6e-20
 Identities = 45/73 (61%), Positives = 58/73 (79%)
 Frame = +3

Query: 3    NKPAEVTLLNVTCFDKKTRQRYTEGPNVEKYKQILVKNAKEKGAESVSYDPVTGEWKFRV 182
            NKPAEVT+LN+ C DK+T  +YTEGP VEKYK++L K  + +GAE VSYDPV GEWKFRV
Sbjct: 917  NKPAEVTILNIKCVDKQTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSYDPVKGEWKFRV 976

Query: 183  NNLNVYSEEDDQE 221
             + + Y+ ED++E
Sbjct: 977  EHFSKYNMEDNEE 989


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