BLASTX nr result

ID: Cimicifuga21_contig00032886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032886
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|...   145   3e-33
ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin ...   142   2e-32
ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789...   141   5e-32
emb|CBI34639.3| unnamed protein product [Vitis vinifera]              141   6e-32

>ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|223541944|gb|EEF43490.1|
            transporter, putative [Ricinus communis]
          Length = 957

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/99 (73%), Positives = 83/99 (83%), Gaps = 6/99 (6%)
 Frame = +2

Query: 116  ERGAQIEAQMPKLRNSDYYTEPQIEELAAKERAKPGFCKHVEGFVVGRRGYGSIKFLGET 295
            E GA IEA MPKLR SDYYTEP+I+ELAAKERA+PGFC+HV+ FVVGR GYGSIKFLGET
Sbjct: 774  EHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFLGET 833

Query: 296  DVRGLDLESLVHFNSREVVVYANNS------ECLNKPAE 394
            DVR LDLESLV FN+REV+VY ++S      + LNKPAE
Sbjct: 834  DVRRLDLESLVQFNNREVIVYTDDSKKPPVGQGLNKPAE 872


>ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin NUP145-like [Cucumis
           sativus]
          Length = 362

 Score =  142 bits (359), Expect = 2e-32
 Identities = 71/99 (71%), Positives = 82/99 (82%), Gaps = 6/99 (6%)
 Frame = +2

Query: 116 ERGAQIEAQMPKLRNSDYYTEPQIEELAAKERAKPGFCKHVEGFVVGRRGYGSIKFLGET 295
           E GA IEA MPKLR+SDYYTEP+I+ELAAKERA+PGFC+HV+ FVVGR GYGSIKF GET
Sbjct: 191 EHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFFGET 250

Query: 296 DVRGLDLESLVHFNSREVVVYANNS------ECLNKPAE 394
           DVR LDLES+V FN+REV+VY + S      + LNKPAE
Sbjct: 251 DVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNKPAE 289


>ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|222860719|gb|EEE98266.1|
            predicted protein [Populus trichocarpa]
          Length = 1007

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/99 (72%), Positives = 82/99 (82%), Gaps = 6/99 (6%)
 Frame = +2

Query: 116  ERGAQIEAQMPKLRNSDYYTEPQIEELAAKERAKPGFCKHVEGFVVGRRGYGSIKFLGET 295
            E GA IEA MPKLR SDY+TEP+I+ELAAKERAKPGFC+HV+ FVVGR GYGSIKF GET
Sbjct: 831  EHGADIEALMPKLRRSDYFTEPRIQELAAKERAKPGFCRHVKDFVVGRHGYGSIKFSGET 890

Query: 296  DVRGLDLESLVHFNSREVVVYANNS------ECLNKPAE 394
            DVR LDLESLV FN+REV+VY ++S      + LNKPAE
Sbjct: 891  DVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAE 929


>ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789177 [Glycine max]
          Length = 1007

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/99 (69%), Positives = 82/99 (82%), Gaps = 6/99 (6%)
 Frame = +2

Query: 116  ERGAQIEAQMPKLRNSDYYTEPQIEELAAKERAKPGFCKHVEGFVVGRRGYGSIKFLGET 295
            E GA +EA MPKLR SDYYT P+I ELAAKERA+PGFC HV+ FVVGR+GYGSI+FLGET
Sbjct: 834  EHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGET 893

Query: 296  DVRGLDLESLVHFNSREVVVYANNS------ECLNKPAE 394
            D+RGLDLESL+ FN+REV+VY ++S      + LNKPAE
Sbjct: 894  DIRGLDLESLIQFNNREVIVYMDDSKKPPVGQGLNKPAE 932


>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/99 (71%), Positives = 82/99 (82%), Gaps = 6/99 (6%)
 Frame = +2

Query: 116  ERGAQIEAQMPKLRNSDYYTEPQIEELAAKERAKPGFCKHVEGFVVGRRGYGSIKFLGET 295
            E GA IEA MPKLR SDYYTEP+I+ELAAKERA+PGFC+ V+ FVVGR GYGSIKF+GET
Sbjct: 870  EHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFMGET 929

Query: 296  DVRGLDLESLVHFNSREVVVYANNS------ECLNKPAE 394
            DVR LDLESLV FN+REV+VY ++S      + LNKPAE
Sbjct: 930  DVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAE 968


Top