BLASTX nr result

ID: Cimicifuga21_contig00032856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032856
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]      179   2e-43
ref|XP_003548959.1| PREDICTED: putative disease resistance prote...   179   3e-43
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   174   7e-42
emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]   174   9e-42
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]   171   4e-41

>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
          Length = 931

 Score =  179 bits (455), Expect = 2e-43
 Identities = 81/109 (74%), Positives = 94/109 (86%)
 Frame = -2

Query: 328  DKFSLSQCPQNELEREKMKDFPYVSLVGSLMYAQVCTRPDISFVVGMLGCYQSNPGLDHW 149
            DKFS  QCP+NELER++MK   Y S+VGSL Y Q CTRPDISF VGMLG YQSNPG+DHW
Sbjct: 715  DKFSEMQCPKNELERKEMKKVSYASVVGSLNYVQTCTRPDISFAVGMLGRYQSNPGMDHW 774

Query: 148  KAVKKVLRYLQGTKKHILTFRKTDHLEVIGYTNSDFGGCVDTRKITFGY 2
            KA KKVLRYLQGTK H+LT+R+TDHLE+IGY++SD+ GCVD+RK TFGY
Sbjct: 775  KAAKKVLRYLQGTKDHMLTYRRTDHLEIIGYSDSDYAGCVDSRKSTFGY 823


>ref|XP_003548959.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 918

 Score =  179 bits (453), Expect = 3e-43
 Identities = 78/109 (71%), Positives = 97/109 (88%)
 Frame = -2

Query: 328 DKFSLSQCPQNELEREKMKDFPYVSLVGSLMYAQVCTRPDISFVVGMLGCYQSNPGLDHW 149
           DKFSL+QCP+N+LER++M++  Y S+VGS+MYAQ CTRPDISF  GMLG YQSNPG++HW
Sbjct: 15  DKFSLAQCPKNDLERKQMEEISYASVVGSIMYAQTCTRPDISFATGMLGRYQSNPGMEHW 74

Query: 148 KAVKKVLRYLQGTKKHILTFRKTDHLEVIGYTNSDFGGCVDTRKITFGY 2
           KA KKVLRYLQGTK H+LT++++DHLEVIGY++SDF GCVDTRK T G+
Sbjct: 75  KAAKKVLRYLQGTKDHMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTLGF 123


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  174 bits (441), Expect = 7e-42
 Identities = 76/109 (69%), Positives = 97/109 (88%)
 Frame = -2

Query: 328  DKFSLSQCPQNELEREKMKDFPYVSLVGSLMYAQVCTRPDISFVVGMLGCYQSNPGLDHW 149
            D+F+L+QCP+N+ ERE+MK+ PY S+VGSLMYAQVCTRPDI+F VGMLG YQSNPG+DHW
Sbjct: 1077 DRFNLNQCPKNDFEREQMKNIPYASVVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHW 1136

Query: 148  KAVKKVLRYLQGTKKHILTFRKTDHLEVIGYTNSDFGGCVDTRKITFGY 2
            +A KKVLRYLQGTK ++L +R+TD+L+ IGY++SDF GCVD+R+ T GY
Sbjct: 1137 RAAKKVLRYLQGTKDYMLMYRQTDNLDAIGYSDSDFAGCVDSRRSTSGY 1185


>emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]
          Length = 1851

 Score =  174 bits (440), Expect = 9e-42
 Identities = 77/109 (70%), Positives = 95/109 (87%)
 Frame = -2

Query: 328  DKFSLSQCPQNELEREKMKDFPYVSLVGSLMYAQVCTRPDISFVVGMLGCYQSNPGLDHW 149
            D+F+L QCP+N+LERE+MK+ PY S VGSLMY QVCTRPDI+F VGMLG YQSNPG+DHW
Sbjct: 824  DRFNLDQCPKNDLEREQMKNIPYASDVGSLMYVQVCTRPDIAFTVGMLGRYQSNPGMDHW 883

Query: 148  KAVKKVLRYLQGTKKHILTFRKTDHLEVIGYTNSDFGGCVDTRKITFGY 2
            KA KKV+RYLQGTK ++L +R+TD+LEVIGY +SD+ GC+D+RK T GY
Sbjct: 884  KATKKVMRYLQGTKDYMLMYRRTDNLEVIGYFDSDYAGCIDSRKSTSGY 932


>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
          Length = 745

 Score =  171 bits (434), Expect = 4e-41
 Identities = 77/109 (70%), Positives = 94/109 (86%)
 Frame = -2

Query: 328 DKFSLSQCPQNELEREKMKDFPYVSLVGSLMYAQVCTRPDISFVVGMLGCYQSNPGLDHW 149
           ++F+L QCP+N+LERE+MK+ PY S VGSLMYAQVCTRPDI+F VGMLG YQSNPG DHW
Sbjct: 462 NRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGKDHW 521

Query: 148 KAVKKVLRYLQGTKKHILTFRKTDHLEVIGYTNSDFGGCVDTRKITFGY 2
           KA KKV+RYLQGTK + L +R+T +LEV+GY++SDF GCVD+RK T GY
Sbjct: 522 KAAKKVMRYLQGTKDYKLMYRRTSNLEVVGYSDSDFAGCVDSRKSTSGY 570


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