BLASTX nr result

ID: Cimicifuga21_contig00032826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032826
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310176.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus c...    75   6e-12

>ref|XP_002310176.1| predicted protein [Populus trichocarpa] gi|222853079|gb|EEE90626.1|
           predicted protein [Populus trichocarpa]
          Length = 868

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = +3

Query: 3   KCNVSMGKLNVDLGPSSIMSLALLQRQIQQTLH--PSHGRTAV-LSQSPSIKVPEEVKWE 173
           KC+++ GKLN+ LG SS++SLA+L  QIQ  L+   S GR  V L+  P+I+  EE+ WE
Sbjct: 653 KCSLTAGKLNLALGYSSVLSLAILLGQIQHALNLNESTGRATVPLNFPPTIENQEEISWE 712

Query: 174 VFPNSHESGIKMAMLRLIPEKKIQIGLVMAGPKIQISLQDGLYNANKQDVNSN 332
                + + +K+  LR++PEK I++G+ + GP I+++ +    N+  +D N +
Sbjct: 713 DKYELYSNRLKLTFLRMLPEKHIELGVFVTGPCIEMTPRKVGLNSGDKDTNQD 765


>ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus communis]
            gi|223538452|gb|EEF40058.1| hypothetical protein
            RCOM_0603630 [Ricinus communis]
          Length = 1720

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 45/117 (38%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3    KCNVSMGKLNVDLGPSSIMSLALLQRQIQQTLH--PSHGRTAVLS-QSPSIKVPEEVKWE 173
            KCN+++GKLN+ LG  S++S+A+L  Q+Q  L     +GR +V S  +P+ +   E+  E
Sbjct: 657  KCNLTVGKLNITLGYLSMISMAILLEQMQHALKWTNDNGRVSVRSIPTPTFQDQSEIVLE 716

Query: 174  VFPNSHESGIKMAMLRLIPEKKIQIGLVMAGPKIQISLQDGLYNANKQDVNSNVTQD 344
               + +   +K  +LR +PEK IQ+G+++AGP IQ+S++    N+ K+D N  V QD
Sbjct: 717  GKYDDYVGKMKKTLLRRLPEKCIQLGVLIAGPHIQMSVRKIGSNSGKKDENYIVGQD 773


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