BLASTX nr result

ID: Cimicifuga21_contig00032824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032824
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299727.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|XP_002515994.1| Cytochrome c oxidase assembly protein COX19,...   164   1e-38
dbj|BAK05956.1| predicted protein [Hordeum vulgare subsp. vulgare]    162   4e-38
ref|XP_002468590.1| hypothetical protein SORBIDRAFT_01g048650 [S...   161   9e-38
ref|NP_001046657.2| Os02g0313500 [Oryza sativa Japonica Group] g...   159   3e-37

>ref|XP_002299727.1| predicted protein [Populus trichocarpa] gi|222846985|gb|EEE84532.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  169 bits (428), Expect = 3e-40
 Identities = 79/97 (81%), Positives = 86/97 (88%), Gaps = 1/97 (1%)
 Frame = -3

Query: 470 MSTGGAFGGNRGFRPVPPEKGVFPLDHMHECDLEKKDYISCLKTTGHQSEKCRNFSKKYL 291
           MS GGAFGGNRG RPVPPEKG+FPLDHMHECDLEKKDY++CLK++GHQSEKCR FSKKYL
Sbjct: 1   MSAGGAFGGNRGLRPVPPEKGIFPLDHMHECDLEKKDYLNCLKSSGHQSEKCRLFSKKYL 60

Query: 290 ECRMAKNLMAKQDMSELGFGKAHDRDASAEK-NENID 183
           ECRM KNLMAKQDMSELGFGK  + DA  EK NE I+
Sbjct: 61  ECRMEKNLMAKQDMSELGFGKVSEIDAPGEKPNERIN 97


>ref|XP_002515994.1| Cytochrome c oxidase assembly protein COX19, putative [Ricinus
           communis] gi|223544899|gb|EEF46414.1| Cytochrome c
           oxidase assembly protein COX19, putative [Ricinus
           communis]
          Length = 94

 Score =  164 bits (414), Expect = 1e-38
 Identities = 74/91 (81%), Positives = 82/91 (90%)
 Frame = -3

Query: 470 MSTGGAFGGNRGFRPVPPEKGVFPLDHMHECDLEKKDYISCLKTTGHQSEKCRNFSKKYL 291
           MS GGAFGGNRG RPVPPEKG+FPLDHMHECDLEKKDY++CLK++GHQSEKCR FSKKYL
Sbjct: 1   MSAGGAFGGNRGLRPVPPEKGIFPLDHMHECDLEKKDYLNCLKSSGHQSEKCRLFSKKYL 60

Query: 290 ECRMAKNLMAKQDMSELGFGKAHDRDASAEK 198
           ECRM KNLMA+QDMSELGF K  D +AS E+
Sbjct: 61  ECRMEKNLMARQDMSELGFRKEPDLEASGER 91


>dbj|BAK05956.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 110

 Score =  162 bits (410), Expect = 4e-38
 Identities = 75/105 (71%), Positives = 87/105 (82%)
 Frame = -3

Query: 470 MSTGGAFGGNRGFRPVPPEKGVFPLDHMHECDLEKKDYISCLKTTGHQSEKCRNFSKKYL 291
           MS GGAFGGNRG RPVPPEKGVFPLDH+HECDLEKKDY++CLK+TG QSEKCR FSKKYL
Sbjct: 5   MSAGGAFGGNRGVRPVPPEKGVFPLDHLHECDLEKKDYLACLKSTGAQSEKCRMFSKKYL 64

Query: 290 ECRMAKNLMAKQDMSELGFGKAHDRDASAEKNENIDGTTSPSRSQ 156
           ECRM +NLMAKQDMSELGFG A    A +E+ + +  + S S+ +
Sbjct: 65  ECRMERNLMAKQDMSELGFGNADVVVAPSEEKDKLQSSASDSKER 109


>ref|XP_002468590.1| hypothetical protein SORBIDRAFT_01g048650 [Sorghum bicolor]
           gi|241922444|gb|EER95588.1| hypothetical protein
           SORBIDRAFT_01g048650 [Sorghum bicolor]
          Length = 109

 Score =  161 bits (407), Expect = 9e-38
 Identities = 75/110 (68%), Positives = 87/110 (79%)
 Frame = -3

Query: 470 MSTGGAFGGNRGFRPVPPEKGVFPLDHMHECDLEKKDYISCLKTTGHQSEKCRNFSKKYL 291
           MS GGAFGGNRG RPVPPEKGVFPLDH+HECDLEKKDY++CLK+TG QSEKCR FSKKYL
Sbjct: 1   MSAGGAFGGNRGVRPVPPEKGVFPLDHLHECDLEKKDYLACLKSTGFQSEKCRQFSKKYL 60

Query: 290 ECRMAKNLMAKQDMSELGFGKAHDRDASAEKNENIDGTTSPSRSQSKPIA 141
           ECRM +NLMAKQDMSELGF    + D S + N  ++  + P+  +   IA
Sbjct: 61  ECRMERNLMAKQDMSELGFRNMDEADTSHDMNRQLE--SPPNEQKENKIA 108


>ref|NP_001046657.2| Os02g0313500 [Oryza sativa Japonica Group]
           gi|215767662|dbj|BAG99890.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255670833|dbj|BAF08571.2| Os02g0313500 [Oryza sativa
           Japonica Group]
          Length = 106

 Score =  159 bits (403), Expect = 3e-37
 Identities = 73/100 (73%), Positives = 82/100 (82%)
 Frame = -3

Query: 470 MSTGGAFGGNRGFRPVPPEKGVFPLDHMHECDLEKKDYISCLKTTGHQSEKCRNFSKKYL 291
           MS GGAFGGNRG RPVPPEKGVFPLDH+HECDLEKKDY++CLK+TG QSEKCR FSKKYL
Sbjct: 1   MSAGGAFGGNRGVRPVPPEKGVFPLDHLHECDLEKKDYLACLKSTGFQSEKCRQFSKKYL 60

Query: 290 ECRMAKNLMAKQDMSELGFGKAHDRDASAEKNENIDGTTS 171
           ECRM +NLMAKQDMSELGF      + S  K  N++ + S
Sbjct: 61  ECRMERNLMAKQDMSELGFRSEDVMNPSPNKKNNLESSAS 100


Top