BLASTX nr result

ID: Cimicifuga21_contig00032800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032800
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]                     169   2e-40
ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...   169   3e-40
ref|XP_002312786.1| porin/voltage-dependent anion-selective chan...   169   3e-40
ref|XP_003631280.1| PREDICTED: mitochondrial outer membrane prot...   168   5e-40
ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...   168   5e-40

>gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]
          Length = 276

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/129 (62%), Positives = 100/129 (77%)
 Frame = +3

Query: 3   GISTGISFAKNPIVNFSSVIGNNVLSLGTDVSFGDETRNFTKCNIALRFTYNDLISSLSL 182
           GIST I    NPIVNFS V+GNN+LSLGTD+SF   + NFTKCN  L FT+ DLI+SL L
Sbjct: 116 GISTSIGLTANPIVNFSGVVGNNLLSLGTDLSFDTASGNFTKCNAGLNFTHTDLIASLIL 175

Query: 183 NDKGHTLNASFYKLTNPRTYTAVGAELAHNLSTNKNTVTFGTQHALDPLTTMKARMNNYG 362
           NDK  T+ AS+Y   +P T TAVGAEL+H+ S+N+N++T GTQHALDPLTT+K R+NNYG
Sbjct: 176 NDKADTVTASYYHTVSPLTNTAVGAELSHSFSSNENSLTIGTQHALDPLTTVKGRVNNYG 235

Query: 363 KASLSVQRE 389
           +AS  +Q E
Sbjct: 236 RASALIQHE 244


>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
           gi|449523227|ref|XP_004168625.1| PREDICTED:
           mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
          Length = 276

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/129 (63%), Positives = 102/129 (79%)
 Frame = +3

Query: 3   GISTGISFAKNPIVNFSSVIGNNVLSLGTDVSFGDETRNFTKCNIALRFTYNDLISSLSL 182
           GIST I    NPIVNFS V+G+N+L+LGTD+SF  +T NFTK N  L F   DLI+SL+L
Sbjct: 116 GISTSIGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175

Query: 183 NDKGHTLNASFYKLTNPRTYTAVGAELAHNLSTNKNTVTFGTQHALDPLTTMKARMNNYG 362
           NDKG TL+AS+Y   NP T TAVGAE+AH+ S+N+NT+T GTQHALDPLT++KAR+NN+G
Sbjct: 176 NDKGDTLSASYYHTVNPLTSTAVGAEVAHSFSSNENTITVGTQHALDPLTSVKARVNNFG 235

Query: 363 KASLSVQRE 389
           KAS  +Q E
Sbjct: 236 KASALIQHE 244


>ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118481103|gb|ABK92505.1| unknown
           [Populus trichocarpa] gi|222852606|gb|EEE90153.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/129 (62%), Positives = 101/129 (78%)
 Frame = +3

Query: 3   GISTGISFAKNPIVNFSSVIGNNVLSLGTDVSFGDETRNFTKCNIALRFTYNDLISSLSL 182
           GIST +    NPIVNFS V+G+NV++LGTD+SF   T NFTKCN  L +T +DLI+SL++
Sbjct: 116 GISTSLGLTANPIVNFSGVVGSNVVALGTDLSFDTATGNFTKCNAGLSYTNSDLIASLTV 175

Query: 183 NDKGHTLNASFYKLTNPRTYTAVGAELAHNLSTNKNTVTFGTQHALDPLTTMKARMNNYG 362
           NDKG TL+AS+Y   +P T TAVGAEL H+ S+N+N +T GTQHALDPLTT+KAR+NNYG
Sbjct: 176 NDKGDTLSASYYHTVSPLTSTAVGAELTHSFSSNENILTIGTQHALDPLTTVKARLNNYG 235

Query: 363 KASLSVQRE 389
           K S  +Q E
Sbjct: 236 KVSALIQNE 244


>ref|XP_003631280.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 2 [Vitis vinifera]
          Length = 247

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/129 (65%), Positives = 97/129 (75%)
 Frame = +3

Query: 3   GISTGISFAKNPIVNFSSVIGNNVLSLGTDVSFGDETRNFTKCNIALRFTYNDLISSLSL 182
           GIST I    NPIVNFS V+GNN LSLGTD+SF   T NFTKCN  L F+  DLI++L+L
Sbjct: 87  GISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTL 146

Query: 183 NDKGHTLNASFYKLTNPRTYTAVGAELAHNLSTNKNTVTFGTQHALDPLTTMKARMNNYG 362
           NDKG TLNAS+Y   +P T TAVGAEL+H  STN+NT+T GTQHALDPLT +KAR NN G
Sbjct: 147 NDKGDTLNASYYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSG 206

Query: 363 KASLSVQRE 389
           K S  +Q E
Sbjct: 207 KVSALIQHE 215


>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 1 [Vitis vinifera]
          Length = 276

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/129 (65%), Positives = 97/129 (75%)
 Frame = +3

Query: 3   GISTGISFAKNPIVNFSSVIGNNVLSLGTDVSFGDETRNFTKCNIALRFTYNDLISSLSL 182
           GIST I    NPIVNFS V+GNN LSLGTD+SF   T NFTKCN  L F+  DLI++L+L
Sbjct: 116 GISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTL 175

Query: 183 NDKGHTLNASFYKLTNPRTYTAVGAELAHNLSTNKNTVTFGTQHALDPLTTMKARMNNYG 362
           NDKG TLNAS+Y   +P T TAVGAEL+H  STN+NT+T GTQHALDPLT +KAR NN G
Sbjct: 176 NDKGDTLNASYYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSG 235

Query: 363 KASLSVQRE 389
           K S  +Q E
Sbjct: 236 KVSALIQHE 244


Top