BLASTX nr result

ID: Cimicifuga21_contig00032792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032792
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16036.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif...   173   1e-41
ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   171   7e-41
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   166   1e-39
ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|...   160   1e-37

>emb|CBI16036.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  173 bits (439), Expect = 1e-41
 Identities = 78/122 (63%), Positives = 100/122 (81%)
 Frame = +2

Query: 5   GMPPSNNSGTMTHMTFFWGSNSAILFSDWPGTSNGMYVLALIVVFTLSILIEWLSHSRFI 184
           GMPP ++   M HMTF+WG  + ILFS WPGT +GMY LALIVVF ++I++EWLSH + I
Sbjct: 23  GMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLI 82

Query: 185 KEGYSHVSAGILQSLLHMFRVGLSYLVMLAVMSFNGGVFLVVVAGHSVGFLVFGSRVFKP 364
           K G +HV+AG++Q+LLH  R+GL Y+VMLA+MSFNGG+FLV VAGH+VGFLVFGSR+F+ 
Sbjct: 83  KPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFRG 142

Query: 365 EE 370
            E
Sbjct: 143 SE 144


>ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496076|gb|ADW93915.1| copper transporter [Vitis
           vinifera]
          Length = 177

 Score =  173 bits (439), Expect = 1e-41
 Identities = 78/122 (63%), Positives = 100/122 (81%)
 Frame = +2

Query: 5   GMPPSNNSGTMTHMTFFWGSNSAILFSDWPGTSNGMYVLALIVVFTLSILIEWLSHSRFI 184
           GMPP ++   M HMTF+WG  + ILFS WPGT +GMY LALIVVF ++I++EWLSH + I
Sbjct: 40  GMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLI 99

Query: 185 KEGYSHVSAGILQSLLHMFRVGLSYLVMLAVMSFNGGVFLVVVAGHSVGFLVFGSRVFKP 364
           K G +HV+AG++Q+LLH  R+GL Y+VMLA+MSFNGG+FLV VAGH+VGFLVFGSR+F+ 
Sbjct: 100 KPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFRG 159

Query: 365 EE 370
            E
Sbjct: 160 SE 161


>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  171 bits (432), Expect = 7e-41
 Identities = 76/113 (67%), Positives = 96/113 (84%)
 Frame = +2

Query: 35  MTHMTFFWGSNSAILFSDWPGTSNGMYVLALIVVFTLSILIEWLSHSRFIKEGYSHVSAG 214
           MTHMTFFWG ++ ILFS WPGTS GMYVLAL+ +F L++L+EWLSH R +K G ++V+AG
Sbjct: 29  MTHMTFFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAG 88

Query: 215 ILQSLLHMFRVGLSYLVMLAVMSFNGGVFLVVVAGHSVGFLVFGSRVFKPEEV 373
           ++Q+L+H  RVGL+Y+VMLAVMSFNGGVF+V VAGH VGF +FGSRVFK  E+
Sbjct: 89  LIQALMHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFKDTEM 141


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/123 (61%), Positives = 97/123 (78%)
 Frame = +2

Query: 5   GMPPSNNSGTMTHMTFFWGSNSAILFSDWPGTSNGMYVLALIVVFTLSILIEWLSHSRFI 184
           GM P ++   M HMTF+WG  + ILFS WPG  +GMY LALIVVF + I++EWLS+ R I
Sbjct: 19  GMSPMHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSYCRLI 78

Query: 185 KEGYSHVSAGILQSLLHMFRVGLSYLVMLAVMSFNGGVFLVVVAGHSVGFLVFGSRVFKP 364
           K G +H +AG++Q+LLH  R+GL+Y+VMLA+MSFNGGVFLV VAGH+VGFLVFGSRV + 
Sbjct: 79  KPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGSRVCRG 138

Query: 365 EEV 373
            E+
Sbjct: 139 SEM 141


>ref|XP_002313411.1| copper transporter [Populus trichocarpa]
           gi|118485983|gb|ABK94836.1| unknown [Populus
           trichocarpa] gi|222849819|gb|EEE87366.1| copper
           transporter [Populus trichocarpa]
          Length = 162

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/127 (61%), Positives = 98/127 (77%), Gaps = 10/127 (7%)
 Frame = +2

Query: 11  PPSNNSGTMTH-------MTFFWGSNSAILFSDWPGTSNG---MYVLALIVVFTLSILIE 160
           PP N +GTM H       MTFFWG ++ ILFS WPG+S+    MY +AL+ VF LSIL+E
Sbjct: 20  PPMNMAGTMQHHEMMMMHMTFFWGKSTEILFSGWPGSSDKRPHMYFVALLFVFVLSILVE 79

Query: 161 WLSHSRFIKEGYSHVSAGILQSLLHMFRVGLSYLVMLAVMSFNGGVFLVVVAGHSVGFLV 340
           WLSH + +K G +HV+AG++Q+LLH  RVGL+Y+VMLA+MSFNGGVFL  VAGH++GFL 
Sbjct: 80  WLSHCQLMKPGSNHVAAGLVQTLLHALRVGLAYMVMLAIMSFNGGVFLAAVAGHTLGFLF 139

Query: 341 FGSRVFK 361
           FGSRVFK
Sbjct: 140 FGSRVFK 146


Top