BLASTX nr result
ID: Cimicifuga21_contig00032783
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032783 (976 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat... 398 e-108 ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat... 382 e-104 ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat... 354 2e-95 ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arab... 332 8e-89 ref|NP_001031987.1| pentatricopeptide repeat-containing protein ... 330 3e-88 >ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405-like [Vitis vinifera] Length = 615 Score = 398 bits (1022), Expect = e-108 Identities = 195/285 (68%), Positives = 238/285 (83%), Gaps = 1/285 (0%) Frame = +1 Query: 124 MTSIKYIAKHPTLSLLESCTTLKQIKQIHSQLLTSGYLNDPHLFGQFVSSIALKHPNNLD 303 M+S++ I KHPT+S++E CTTL+++KQIH+QLL +G LNDP L GQFV+SIAL +PNNL Sbjct: 1 MSSLRCIVKHPTISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLH 60 Query: 304 YSNQVLNQFQNPTVFTLNSMIRAHSKSSTPHRSFHYYHQILQSDN-LSLDNYTFTFLVRT 480 YSNQVL+ QNPT+FT NSMIRAHSKSSTPHRSFH+Y +IL S L+ DNYTFTFLVRT Sbjct: 61 YSNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRT 120 Query: 481 CTQILSPDTGSAVHAAVIKHGFQTGCHVQCALVQMYAELGFLDSSRRLFSDIPDPDLVSQ 660 Q+L+ TGS+VH A +K+GF+ HVQ L+ MYAELG LD+ R+FS I +PDLV Q Sbjct: 121 SAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQ 180 Query: 661 TAMVSACARSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQCGRSREALDLFHLMQMESVK 840 TAMVSACA+ G++ FARKLFD M +DPIAW+AMI+GY QCG+SREAL LF+LMQ E VK Sbjct: 181 TAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVK 240 Query: 841 VNEAAMVSVLSACSHLGALDQGKWANAYIERNKLCITVTLGSALV 975 VNE +MVSVLSACSHLGALDQG+WA+AYIERNKL +T+TLG+AL+ Sbjct: 241 VNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALI 285 Score = 69.7 bits (169), Expect = 1e-09 Identities = 46/223 (20%), Positives = 98/223 (43%) Frame = +1 Query: 241 DPHLFGQFVSSIALKHPNNLDYSNQVLNQFQNPTVFTLNSMIRAHSKSSTPHRSFHYYHQ 420 +P L Q A ++ ++ ++ ++ + N+MI + + + ++ Sbjct: 174 EPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFN- 232 Query: 421 ILQSDNLSLDNYTFTFLVRTCTQILSPDTGSAVHAAVIKHGFQTGCHVQCALVQMYAELG 600 ++Q + + ++ + ++ C+ + + D G HA + ++ + + AL+ MYA+ G Sbjct: 233 LMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCG 292 Query: 601 FLDSSRRLFSDIPDPDLVSQTAMVSACARSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQ 780 ++ A ++F GM ++ WS+ I G A Sbjct: 293 NMNK-------------------------------AMEVFWGMKEKNVYTWSSAIGGLAM 321 Query: 781 CGRSREALDLFHLMQMESVKVNEAAMVSVLSACSHLGALDQGK 909 G + L+LF LM+ +SV+ NE VSVL CS +G +++G+ Sbjct: 322 NGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGR 364 >ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405-like [Glycine max] Length = 616 Score = 382 bits (980), Expect = e-104 Identities = 188/286 (65%), Positives = 229/286 (80%), Gaps = 2/286 (0%) Frame = +1 Query: 124 MTSIKYIAKHPTLSLLESCTTLKQIKQIHSQLLTSGYLNDPHLFGQFVSSIALKHPNNLD 303 M S+K IAKHPT+SLL SCTTLK++KQIH+QL+ G LN+PH GQFV++IAL + NLD Sbjct: 1 MKSVKRIAKHPTISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLD 60 Query: 304 YSNQVLNQFQNPTVFTLNSMIRAHSKSSTPHRSFHYYHQILQSDN--LSLDNYTFTFLVR 477 Y+N++LN NPT+FTLNSMIRA+SKSSTP +SFH+Y IL S+N LS DNYTFTFLVR Sbjct: 61 YANKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVR 120 Query: 478 TCTQILSPDTGSAVHAAVIKHGFQTGCHVQCALVQMYAELGFLDSSRRLFSDIPDPDLVS 657 TC Q+ + TG VH AVIKHGF+ HVQ LV MYAELG L S +F +PDLV+ Sbjct: 121 TCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVT 180 Query: 658 QTAMVSACARSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQCGRSREALDLFHLMQMESV 837 QTAM++ACA+ G+IDFARK+FD MP RD + W+AMIAGYAQCGRSREALD+FHLMQME V Sbjct: 181 QTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGV 240 Query: 838 KVNEAAMVSVLSACSHLGALDQGKWANAYIERNKLCITVTLGSALV 975 K+NE +MV VLSAC+HL LD G+W +AY+ER K+ +TVTLG+ALV Sbjct: 241 KLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALV 286 Score = 83.6 bits (205), Expect = 7e-14 Identities = 56/223 (25%), Positives = 100/223 (44%) Frame = +1 Query: 241 DPHLFGQFVSSIALKHPNNLDYSNQVLNQFQNPTVFTLNSMIRAHSKSSTPHRSFHYYHQ 420 +P L Q A ++D++ ++ ++ T N+MI +++ + +H Sbjct: 175 EPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFH- 233 Query: 421 ILQSDNLSLDNYTFTFLVRTCTQILSPDTGSAVHAAVIKHGFQTGCHVQCALVQMYAELG 600 ++Q + + L+ + ++ CT H V+ HG +V+ V+M LG Sbjct: 234 LMQMEGVKLNEVSMVLVLSACT-----------HLQVLDHGRWVHAYVERYKVRMTVTLG 282 Query: 601 FLDSSRRLFSDIPDPDLVSQTAMVSACARSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQ 780 TA+V A+ G +D A ++F GM R+ WS+ I G A Sbjct: 283 --------------------TALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAM 322 Query: 781 CGRSREALDLFHLMQMESVKVNEAAMVSVLSACSHLGALDQGK 909 G E+LDLF+ M+ E V+ N +SVL CS +G +++G+ Sbjct: 323 NGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGR 365 >ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405-like [Cucumis sativus] Length = 614 Score = 354 bits (908), Expect = 2e-95 Identities = 175/285 (61%), Positives = 228/285 (80%), Gaps = 1/285 (0%) Frame = +1 Query: 124 MTSIKYIAKHPTLSLLESCTTLKQIKQIHSQLLTSGYLNDPHLFGQFVSSIALKHPNNLD 303 M++++ IAKHPT++L++S TLK++KQIH+QL+ +G LN+ L GQFV+SIA+++P NL Sbjct: 1 MSTLRNIAKHPTIALIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLL 60 Query: 304 YSNQVLNQFQNPTVFTLNSMIRAHSKSSTPHRSFHYYHQILQS-DNLSLDNYTFTFLVRT 480 YSNQ+L+Q PT+F LNSMIRA+SKS TPH+SF +Y++ILQS D +S DNYTF FLVRT Sbjct: 61 YSNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRT 120 Query: 481 CTQILSPDTGSAVHAAVIKHGFQTGCHVQCALVQMYAELGFLDSSRRLFSDIPDPDLVSQ 660 C Q + G AVH A+IKHGF+ HV+ L+ MYAE+ L S R+F + PDLV Q Sbjct: 121 CAQSAC-EAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQ 179 Query: 661 TAMVSACARSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQCGRSREALDLFHLMQMESVK 840 T MVSACA+ G+I FAR LFD MP RD ++W+AMIAGYAQ G+SREAL+LF LMQM+ VK Sbjct: 180 TTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVK 239 Query: 841 VNEAAMVSVLSACSHLGALDQGKWANAYIERNKLCITVTLGSALV 975 VNE +M+SV++AC+HLGALDQGKWA+AYIE+NK+ +TV LG+ALV Sbjct: 240 VNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALV 284 Score = 75.9 bits (185), Expect = 1e-11 Identities = 70/316 (22%), Positives = 122/316 (38%), Gaps = 32/316 (10%) Frame = +1 Query: 58 TKSMSPHLSLLITVHLFP*IQTMTSIKYIAKHPTLSLLESC--TTLKQIKQIHSQLLTSG 231 +KS++PH S + M+ Y L+ +C + + +H L+ G Sbjct: 85 SKSLTPHKSFQFYNKILQSNDVMSPDNYTFNF----LVRTCAQSACEAGPAVHGALIKHG 140 Query: 232 YLNDPHLFGQFVSSIALKHPNNLDYSNQVLNQFQNPTVFTLNSMIRAHSK---------- 381 + DPH+ + A + L ++V Q P + +M+ A +K Sbjct: 141 FEYDPHVESGLIFMYA--EMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNL 198 Query: 382 -SSTPHRSFHYYH-------------------QILQSDNLSLDNYTFTFLVRTCTQILSP 501 S P R F ++ +++Q D + ++ + +V CT + + Sbjct: 199 FDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGAL 258 Query: 502 DTGSAVHAAVIKHGFQTGCHVQCALVQMYAELGFLDSSRRLFSDIPDPDLVSQTAMVSAC 681 D G HA + K+ Q ++ ALV MY Sbjct: 259 DQGKWAHAYIEKNKIQMTVNLGTALVDMYF------------------------------ 288 Query: 682 ARSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQCGRSREALDLFHLMQMESVKVNEAAMV 861 + G +D A K+F M ++ WS I G A G ++ L+LF M+ E + NE + Sbjct: 289 -KCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFI 347 Query: 862 SVLSACSHLGALDQGK 909 SVL CS +G +D+G+ Sbjct: 348 SVLKGCSVVGFVDEGR 363 >ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp. lyrata] gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp. lyrata] Length = 1111 Score = 332 bits (851), Expect = 8e-89 Identities = 163/279 (58%), Positives = 207/279 (74%), Gaps = 1/279 (0%) Frame = +1 Query: 142 IAKHPTLSLLESCTTLKQIKQIHSQLLTSGYLNDPHLFGQFVSSIALKHPNNLDYSNQVL 321 I KHP +SLL+S TT K+I+QIH++L G L D HL GQFV ++AL LDY+NQ+L Sbjct: 12 IVKHPAISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQIL 71 Query: 322 NQFQNPTVFTLNSMIRAHSKSSTPHRSFHYYHQILQSDN-LSLDNYTFTFLVRTCTQILS 498 ++ PT+F LNSMIRAH KS P +SF +Y +IL S N L DNYT FLV+ CT + Sbjct: 72 DRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGM 131 Query: 499 PDTGSAVHAAVIKHGFQTGCHVQCALVQMYAELGFLDSSRRLFSDIPDPDLVSQTAMVSA 678 +TG VH I+ GF HVQ L+ +YAELG LDS ++F+ + PD V +TAMV+A Sbjct: 132 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTA 191 Query: 679 CARSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQCGRSREALDLFHLMQMESVKVNEAAM 858 CAR G++ FARKLF+GMP +DPIAW+AMI+GYAQ G SREAL+LFHLMQ+E VKVN +M Sbjct: 192 CARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSM 251 Query: 859 VSVLSACSHLGALDQGKWANAYIERNKLCITVTLGSALV 975 +SVLSAC+ LGALDQG+WA++YIERNK+ ITV LG+ LV Sbjct: 252 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLV 290 Score = 71.2 bits (173), Expect = 3e-10 Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 7/255 (2%) Frame = +1 Query: 166 LLESCTTLKQIK---QIHSQLLTSGYLNDPHLFGQFVSSIALKHPNNLDYSNQVLNQFQN 336 L+++CT L + Q+H + G+ NDPH+ +S A LD ++V N Sbjct: 122 LVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYA--ELGCLDSCHKVFNSVSY 179 Query: 337 PTVFTLNSMIRAHSKSSTPHRSFHYYHQILQSDNLSLDNYTFTFLVRTCTQILSPDTGSA 516 P +M+ A ++ + + + + D ++ + ++ Q+ Sbjct: 180 PDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIA-----WNAMISGYAQVGESREALN 234 Query: 517 VHAAVIKHGFQTGCHVQCALVQMYAELGFLDSSRRLFSDIPDPDLVSQ----TAMVSACA 684 + + G + +++ +LG LD R S I + T +V A Sbjct: 235 LFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYA 294 Query: 685 RSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQCGRSREALDLFHLMQMESVKVNEAAMVS 864 + G++D A ++F GM ++ WS+ + G A G + L LF LM+ + V N VS Sbjct: 295 KCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVS 354 Query: 865 VLSACSHLGALDQGK 909 VL CS +G +D+G+ Sbjct: 355 VLRGCSVVGFVDEGQ 369 Score = 68.6 bits (166), Expect = 2e-09 Identities = 53/236 (22%), Positives = 97/236 (41%) Frame = +1 Query: 205 IHSQLLTSGYLNDPHLFGQFVSSIALKHPNNLDYSNQVLNQFQNPTVFTLNSMIRAHSKS 384 IH ++ SG L + + ++ +L S ++ + + N+MI H ++ Sbjct: 659 IHGLVMKSGVLEEVKVVNALMNLYG--KTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQN 716 Query: 385 STPHRSFHYYHQILQSDNLSLDNYTFTFLVRTCTQILSPDTGSAVHAAVIKHGFQTGCHV 564 Y++ + + L D TF ++R C I +H ++ GF + Sbjct: 717 GLAEEGLAYFN-MSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCI 775 Query: 565 QCALVQMYAELGFLDSSRRLFSDIPDPDLVSQTAMVSACARSGEIDFARKLFDGMPSRDP 744 AL+ +YA+LG L+ S +F +I PD ++ T Sbjct: 776 TTALLDLYAKLGRLEDSSTVFLEITSPDSMAWT--------------------------- 808 Query: 745 IAWSAMIAGYAQCGRSREALDLFHLMQMESVKVNEAAMVSVLSACSHLGALDQGKW 912 AM+A YA G R+A+ F LM + + +L+ACSH G +++G++ Sbjct: 809 ----AMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRY 860 >ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At5g40405 gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana] gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 612 Score = 330 bits (846), Expect = 3e-88 Identities = 161/279 (57%), Positives = 206/279 (73%), Gaps = 1/279 (0%) Frame = +1 Query: 142 IAKHPTLSLLESCTTLKQIKQIHSQLLTSGYLNDPHLFGQFVSSIALKHPNNLDYSNQVL 321 I KHP ++LL+S T K+++QIH++L G L D HL G FV ++AL LDY+NQ+L Sbjct: 4 IGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQIL 63 Query: 322 NQFQNPTVFTLNSMIRAHSKSSTPHRSFHYYHQILQSDN-LSLDNYTFTFLVRTCTQILS 498 ++ + PT+F LNSMIRAH KS P +SF +Y +IL S N L DNYT FLV+ CT + Sbjct: 64 DRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRM 123 Query: 499 PDTGSAVHAAVIKHGFQTGCHVQCALVQMYAELGFLDSSRRLFSDIPDPDLVSQTAMVSA 678 +TG VH I+ GF HVQ L+ +YAELG LDS ++F+ IP PD V +TAMV+A Sbjct: 124 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTA 183 Query: 679 CARSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQCGRSREALDLFHLMQMESVKVNEAAM 858 CAR G++ FARKLF+GMP RDPIAW+AMI+GYAQ G SREAL++FHLMQ+E VKVN AM Sbjct: 184 CARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAM 243 Query: 859 VSVLSACSHLGALDQGKWANAYIERNKLCITVTLGSALV 975 +SVLSAC+ LGALDQG+WA++YIERNK+ ITV L + LV Sbjct: 244 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLV 282 Score = 73.2 bits (178), Expect = 9e-11 Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 7/255 (2%) Frame = +1 Query: 166 LLESCTTLKQIK---QIHSQLLTSGYLNDPHLFGQFVSSIALKHPNNLDYSNQVLNQFQN 336 L+++CT L+ + Q+H + G+ NDPH+ +S A LD ++V N Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYA--ELGCLDSCHKVFNSIPC 171 Query: 337 PTVFTLNSMIRAHSKSSTPHRSFHYYHQILQSDNLSLDNYTFTFLVRTCTQILSPDTGSA 516 P +M+ A ++ + + + + D ++ + ++ Q+ Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIA-----WNAMISGYAQVGESREALN 226 Query: 517 VHAAVIKHGFQTGCHVQCALVQMYAELGFLDSSRRLFSDIPDPDLVSQ----TAMVSACA 684 V + G + +++ +LG LD R S I + T +V A Sbjct: 227 VFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYA 286 Query: 685 RSGEIDFARKLFDGMPSRDPIAWSAMIAGYAQCGRSREALDLFHLMQMESVKVNEAAMVS 864 + G+++ A ++F GM ++ WS+ + G A G + L+LF LM+ + V N VS Sbjct: 287 KCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVS 346 Query: 865 VLSACSHLGALDQGK 909 VL CS +G +D+G+ Sbjct: 347 VLRGCSVVGFVDEGQ 361