BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032774
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_002876469.1| pentatricopeptide repeat-containing protein ...    62   4e-08
ref|XP_002525134.1| pentatricopeptide repeat-containing protein,...    62   6e-08
ref|NP_191418.2| pentatricopeptide repeat-containing protein [Ar...    61   1e-07
emb|CAB68197.1| putative protein [Arabidopsis thaliana]                61   1e-07

>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
 Frame = +3

Query: 252 YPSMALESFREMKSLGIKLD--LL*A*TS-----WMIDEGMELFGRKKESCNIEPEMDHY 410
           Y + AL+ FREM+SLG K D   L A  S      ++ EGMELF + K+SC IEP +DHY
Sbjct: 665 YANEALKLFREMESLGFKPDGVALVAVFSACRHGGLVKEGMELFWQMKKSCGIEPNIDHY 724

Query: 411 ICVVDLLNRFGHRKEAEELVS 473
            CVVDLL R GH +EAE+++S
Sbjct: 725 HCVVDLLARCGHLQEAEQVIS 745


>ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322307|gb|EFH52728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
 Frame = +3

Query: 252 YPSMALESFREMKSLGIKLD-------LL*A*TSWMIDEGMELFGRKKESCNIEPEMDHY 410
           Y   ALE F+E  SLG K D       L       M+ EGM+LF + K+   IEPEMDHY
Sbjct: 627 YGHEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMDLFQKMKDY-GIEPEMDHY 685

Query: 411 ICVVDLLNRFGHRKEAEELV 470
            C VDLL R G+ KEAE L+
Sbjct: 686 RCAVDLLARNGYLKEAEHLI 705


>ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535593|gb|EEF37261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 792

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 7/77 (9%)
 Frame = +3

Query: 264 ALESFREMKSLGIKLD-------LL*A*TSWMIDEGMELFGRKKESCNIEPEMDHYICVV 422
           ALE F++M+  G++ D       L       ++ EG+ELF +K +S  +EPEMDHY C+V
Sbjct: 631 ALERFKDMEHQGLRPDKVAFIAVLTACRHGALVGEGIELF-KKMKSYGLEPEMDHYHCLV 689

Query: 423 DLLNRFGHRKEAEELVS 473
           DL +R GH KEAE+++S
Sbjct: 690 DLFSRHGHVKEAEKVIS 706


>ref|NP_191418.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525906|sp|Q0WN01.2|PP286_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g58590 gi|332646281|gb|AEE79802.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/80 (47%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
 Frame = +3

Query: 252 YPSMALESFREMKSLGIKLD-------LL*A*TSWMIDEGMELFGRKKESCNIEPEMDHY 410
           Y   ALE F+E  SLG K D       L       M+ EGM LF + K+   +EPEMDHY
Sbjct: 627 YGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDY-GVEPEMDHY 685

Query: 411 ICVVDLLNRFGHRKEAEELV 470
            C VDLL R G+ KEAE L+
Sbjct: 686 RCAVDLLARNGYLKEAEHLI 705


>emb|CAB68197.1| putative protein [Arabidopsis thaliana]
          Length = 810

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/80 (47%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
 Frame = +3

Query: 252 YPSMALESFREMKSLGIKLD-------LL*A*TSWMIDEGMELFGRKKESCNIEPEMDHY 410
           Y   ALE F+E  SLG K D       L       M+ EGM LF + K+   +EPEMDHY
Sbjct: 696 YGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDY-GVEPEMDHY 754

Query: 411 ICVVDLLNRFGHRKEAEELV 470
            C VDLL R G+ KEAE L+
Sbjct: 755 RCAVDLLARNGYLKEAEHLI 774