BLASTX nr result

ID: Cimicifuga21_contig00032771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032771
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...   117   1e-24
ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]     115   4e-24
ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]     114   6e-24
ref|XP_004166831.1| PREDICTED: protein RRP5 homolog, partial [Cu...   110   9e-23
ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sat...   110   9e-23

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/90 (61%), Positives = 71/90 (78%)
 Frame = +1

Query: 1    EEKPNRPTQKKKRKRDLSLNLEVHQTVDAIIEIVKENYLVLTLPEFNHAIGYASIADYNT 180
            E+  N    KKKR+R+    L+ HQTV+AI+EIVKENYLVL+LPE+N+AIGYAS++DYNT
Sbjct: 915  EDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLVLSLPEYNYAIGYASVSDYNT 974

Query: 181  QKLPHRHFVNGQSVVVTVGALPDPSTTGRL 270
            QK   + F++GQSV+ +V ALP PST GRL
Sbjct: 975  QKFAQKQFLHGQSVIASVMALPSPSTVGRL 1004


>ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 2174

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/90 (58%), Positives = 71/90 (78%)
 Frame = +1

Query: 1    EEKPNRPTQKKKRKRDLSLNLEVHQTVDAIIEIVKENYLVLTLPEFNHAIGYASIADYNT 180
            +E     T KKKR+R+ S +L +HQTV+A++EIVKENYLVL++PE ++ IGYAS++DYN 
Sbjct: 1054 KESSTSHTNKKKRRREASKDLVLHQTVNAVVEIVKENYLVLSIPENDYTIGYASVSDYNA 1113

Query: 181  QKLPHRHFVNGQSVVVTVGALPDPSTTGRL 270
            Q+ PH+ + NGQSVV TV ALP P T+GRL
Sbjct: 1114 QRFPHKQYQNGQSVVATVMALPSPETSGRL 1143


>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = +1

Query: 22   TQKKKRKRDLSLNLEVHQTVDAIIEIVKENYLVLTLPEFNHAIGYASIADYNTQKLPHRH 201
            T KKKR+R+ S +L +HQTV+A++EIVKENYLVL++PE ++ IGYAS++DYN Q+ PH+ 
Sbjct: 923  TNKKKRRREASKDLVLHQTVNAVVEIVKENYLVLSIPENDYTIGYASVSDYNAQRFPHKQ 982

Query: 202  FVNGQSVVVTVGALPDPSTTGRL 270
            + NGQSVV TV ALP P T+GRL
Sbjct: 983  YQNGQSVVATVMALPSPETSGRL 1005


>ref|XP_004166831.1| PREDICTED: protein RRP5 homolog, partial [Cucumis sativus]
          Length = 1323

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = +1

Query: 13  NRPTQKKKRKRDLSLNLEVHQTVDAIIEIVKENYLVLTLPEFNHAIGYASIADYNTQKLP 192
           +R T +KKRK +   +LE++QTV  ++E VKENYLVL+LPEF HAIGYAS  DYNTQ+L 
Sbjct: 364 SRQTNRKKRKAEAPKDLEMNQTVHTVVEAVKENYLVLSLPEFGHAIGYASTYDYNTQRLH 423

Query: 193 HRHFVNGQSVVVTVGALPDPSTTGRL 270
            +HF  GQSVV TV ALP PST GRL
Sbjct: 424 QKHFTVGQSVVATVVALPCPSTFGRL 449


>ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sativus]
          Length = 1898

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = +1

Query: 13   NRPTQKKKRKRDLSLNLEVHQTVDAIIEIVKENYLVLTLPEFNHAIGYASIADYNTQKLP 192
            +R T +KKRK +   +LE++QTV  ++E VKENYLVL+LPEF HAIGYAS  DYNTQ+L 
Sbjct: 910  SRQTNRKKRKAEAPKDLEMNQTVHTVVEAVKENYLVLSLPEFGHAIGYASTYDYNTQRLH 969

Query: 193  HRHFVNGQSVVVTVGALPDPSTTGRL 270
             +HF  GQSVV TV ALP PST GRL
Sbjct: 970  QKHFTVGQSVVATVVALPCPSTFGRL 995


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