BLASTX nr result

ID: Cimicifuga21_contig00032741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032741
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE65173.1| hypothetical protein OsJ_20281 [Oryza sativa Japo...    58   7e-07
dbj|BAD72178.1| hypothetical protein [Oryza sativa Japonica Group]     58   9e-07
ref|XP_002440131.1| hypothetical protein SORBIDRAFT_09g026600 [S...    58   9e-07
gb|ABA95877.2| F-box protein interaction domain containing prote...    57   1e-06
ref|NP_001066235.1| Os12g0164300 [Oryza sativa Japonica Group] g...    57   1e-06

>gb|EEE65173.1| hypothetical protein OsJ_20281 [Oryza sativa Japonica Group]
          Length = 346

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/63 (42%), Positives = 42/63 (66%)
 Frame = -3

Query: 294 SAMEFPEAILFGILVRIPAKDVIRFKLVCKLWYLLISDPIFVKAHLSHASAAARCHRQLD 115
           +A   PE I+  IL+R+P K ++RF+ VCK W  +++DP FV+  L H++ AAR HR   
Sbjct: 36  AAAGIPEDIVEEILLRLPVKSILRFRSVCKSWRAMVADPRFVRLQLGHSTTAAR-HRPPS 94

Query: 114 ILV 106
           +L+
Sbjct: 95  MLI 97


>dbj|BAD72178.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 346

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/63 (42%), Positives = 42/63 (66%)
 Frame = -3

Query: 294 SAMEFPEAILFGILVRIPAKDVIRFKLVCKLWYLLISDPIFVKAHLSHASAAARCHRQLD 115
           +A   PE I+  IL+R+P K ++RF+ VCK W  +++DP FV+  L H++ AAR HR   
Sbjct: 36  AAAGIPEDIVEEILLRLPVKSILRFRSVCKSWRAVVADPRFVRLQLDHSTTAAR-HRPPS 94

Query: 114 ILV 106
           +L+
Sbjct: 95  MLI 97


>ref|XP_002440131.1| hypothetical protein SORBIDRAFT_09g026600 [Sorghum bicolor]
           gi|241945416|gb|EES18561.1| hypothetical protein
           SORBIDRAFT_09g026600 [Sorghum bicolor]
          Length = 429

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = -3

Query: 276 EAILFGILVRIPAKDVIRFKLVCKLWYLLISDPIFVKAHLSHAS 145
           E I+  ILVR+P K ++RFK VCK W   ISDPIF++AHL H++
Sbjct: 27  EIIVEEILVRLPVKSLVRFKSVCKAWRATISDPIFIRAHLRHSA 70


>gb|ABA95877.2| F-box protein interaction domain containing protein, expressed
           [Oryza sativa Japonica Group]
          Length = 410

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 21/41 (51%), Positives = 33/41 (80%)
 Frame = -3

Query: 279 PEAILFGILVRIPAKDVIRFKLVCKLWYLLISDPIFVKAHL 157
           P+ ++F +L+R+P+K ++RFK VCK W+ +IS PIF+ AHL
Sbjct: 36  PDEVMFDVLLRLPSKSLMRFKSVCKAWHAMISSPIFINAHL 76


>ref|NP_001066235.1| Os12g0164300 [Oryza sativa Japonica Group]
           gi|108862235|gb|ABA95876.2| F-box protein interaction
           domain containing protein, expressed [Oryza sativa
           Japonica Group] gi|113648742|dbj|BAF29254.1|
           Os12g0164300 [Oryza sativa Japonica Group]
          Length = 414

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 21/41 (51%), Positives = 33/41 (80%)
 Frame = -3

Query: 279 PEAILFGILVRIPAKDVIRFKLVCKLWYLLISDPIFVKAHL 157
           P+ ++F +L+R+P+K ++RFK VCK W+ +IS PIF+ AHL
Sbjct: 36  PDEVMFDVLLRLPSKSLMRFKSVCKAWHAMISSPIFINAHL 76


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