BLASTX nr result

ID: Cimicifuga21_contig00032727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032727
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67221.1| hypothetical protein VITISV_024547 [Vitis vinifera]   169   2e-40
ref|XP_002517358.1| Cyclic nucleotide-gated ion channel, putativ...   161   4e-38
ref|XP_004155077.1| PREDICTED: probable cyclic nucleotide-gated ...   161   6e-38
ref|XP_004138284.1| PREDICTED: probable cyclic nucleotide-gated ...   161   6e-38
ref|XP_002331696.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37

>emb|CAN67221.1| hypothetical protein VITISV_024547 [Vitis vinifera]
          Length = 685

 Score =  169 bits (428), Expect = 2e-40
 Identities = 81/135 (60%), Positives = 102/135 (75%), Gaps = 6/135 (4%)
 Frame = -3

Query: 418 TRTVKALYEVEAFALRANDLKYVANQFKLLHSKKLQHVFRYYSHQWRTWGTCLIQCAWRR 239
           TRTV++  +VEAFALRA DLK+VANQFK LHSKKLQH FRYYSHQWRTWG C IQ AWRR
Sbjct: 518 TRTVRSTTKVEAFALRAEDLKFVANQFKRLHSKKLQHAFRYYSHQWRTWGACFIQVAWRR 577

Query: 238 FKKRKLTEELERYENLYHISETD------ETMEGNYEDTAIQSSSMENTSSGQNFGVTVL 77
            K+RKL +EL R E+LY++  +D      E  + +Y+ ++ + SSMEN+  GQ  G TVL
Sbjct: 578 LKRRKLAKELARQESLYYMQISDQEGYLSEMTDADYQTSSAEISSMENSHGGQQIGATVL 637

Query: 76  ASQFAANTRRGVHRK 32
           AS+FAAN R+G+ +K
Sbjct: 638 ASRFAANARKGIQQK 652


>ref|XP_002517358.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223543369|gb|EEF44900.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 654

 Score =  161 bits (408), Expect = 4e-38
 Identities = 84/145 (57%), Positives = 105/145 (72%), Gaps = 7/145 (4%)
 Frame = -3

Query: 418 TRTVKALYEVEAFALRANDLKYVANQFKLLHSKKLQHVFRYYSHQWRTWGTCLIQCAWRR 239
           TRTVKAL EVEAFAL+A DL +VA QFK L SKKLQH FRYYSHQWRTWG  LIQ  WRR
Sbjct: 492 TRTVKALSEVEAFALQAEDLIFVAQQFKRLQSKKLQHAFRYYSHQWRTWGAILIQSVWRR 551

Query: 238 FKKRKLTEELERYENLYHIS-------ETDETMEGNYEDTAIQSSSMENTSSGQNFGVTV 80
           ++KRK+  EL   E+L +I         ++E  EG+YED   +S SMEN ++ Q+ G T+
Sbjct: 552 YQKRKMARELASRESLSYIQIPEDGYYSSNELAEGDYEDEHGESLSMENANNAQHLGATI 611

Query: 79  LASQFAANTRRGVHRKSLIDLDDSS 5
           LAS+FAANTRRG++++ L+D   SS
Sbjct: 612 LASKFAANTRRGINQR-LVDSASSS 635


>ref|XP_004155077.1| PREDICTED: probable cyclic nucleotide-gated ion channel 16-like
           [Cucumis sativus]
          Length = 679

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/129 (62%), Positives = 96/129 (74%)
 Frame = -3

Query: 418 TRTVKALYEVEAFALRANDLKYVANQFKLLHSKKLQHVFRYYSHQWRTWGTCLIQCAWRR 239
           TRTVK+L EVEAFALRA DLK+VA+QFK LHSKKLQH FRYYSHQWRTWG+C IQ AWRR
Sbjct: 528 TRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRR 587

Query: 238 FKKRKLTEELERYENLYHISETDETMEGNYEDTAIQSSSMENTSSGQNFGVTVLASQFAA 59
           + KRKL  EL R E LY+ +  D+    ++ +        E  +  QN G+T+LAS+FAA
Sbjct: 588 YVKRKLAMELARQEELYYTNILDQDHHSSHGN--------EMMNKKQNLGITMLASKFAA 639

Query: 58  NTRRGVHRK 32
           NTRRGVH+K
Sbjct: 640 NTRRGVHQK 648


>ref|XP_004138284.1| PREDICTED: probable cyclic nucleotide-gated ion channel 16-like
           [Cucumis sativus]
          Length = 702

 Score =  161 bits (407), Expect = 6e-38
 Identities = 87/144 (60%), Positives = 101/144 (70%), Gaps = 15/144 (10%)
 Frame = -3

Query: 418 TRTVKALYEVEAFALRANDLKYVANQFKLLHSKKLQHVFRYYSHQWRTWGTCLIQCAWRR 239
           TRTVK+L EVEAFALRA DLK+VA+QFK LHSKKLQH FRYYSHQWRTWG+C IQ AWRR
Sbjct: 528 TRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRR 587

Query: 238 FKKRKLTEELERYENLY---------HISETDETM---EGNYEDTAIQSSS---MENTSS 104
           + KRKL  EL R E LY         H S  +E M   EG  E ++   SS   +   + 
Sbjct: 588 YVKRKLAMELARQEELYYTNILDQDHHSSHGNEMMVGSEGVGETSSTHGSSKTTITTNNK 647

Query: 103 GQNFGVTVLASQFAANTRRGVHRK 32
            QN G+T+LAS+FAANTRRGVH+K
Sbjct: 648 KQNLGITMLASKFAANTRRGVHQK 671


>ref|XP_002331696.1| predicted protein [Populus trichocarpa] gi|222874174|gb|EEF11305.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/139 (58%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
 Frame = -3

Query: 418 TRTVKALYEVEAFALRANDLKYVANQFKLLHSKKLQHVFRYYSHQWRTWGTCLIQCAWRR 239
           TRTVKAL EVEAFALRA DLK+VA QFK LHSKKLQH FRYYSHQWRTWG C IQ AWRR
Sbjct: 529 TRTVKALSEVEAFALRAVDLKFVAKQFKRLHSKKLQHAFRYYSHQWRTWGACYIQSAWRR 588

Query: 238 FKKRKLTEELERYENLYHISETDETMEGNYEDT-AIQSSSMENTSSGQNFGVTVLASQFA 62
           + +RKL  EL R E+L++    +  +E  Y D    +   ++++++G + G T+LAS+FA
Sbjct: 589 YTRRKLQMELARQESLFYSQVMEGEVEYYYSDEGGDERPLVDHSNNGSHLGATMLASKFA 648

Query: 61  ANTRRGVHRKSLIDLDDSS 5
           ANTRRGV  + L   DDS+
Sbjct: 649 ANTRRGVGHQKLPRPDDST 667


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