BLASTX nr result

ID: Cimicifuga21_contig00032719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032719
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containin...    77   2e-12

>ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containing protein 62 [Vitis
           vinifera] gi|297742965|emb|CBI35832.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = +3

Query: 27  MAKSE--PQVLKETGEEYFTEDEDPSTEDCNTDDSEEDPTDDILEKTRXXXXXXXXXXXX 200
           MA SE  P V+ E  E+ ++E E   +ED N  DS++DPT DI E+T+            
Sbjct: 1   MAPSEQLPNVVME--EDDYSETEGSDSEDSN--DSQDDPTYDIFEETQSGFSNLSMEKKS 56

Query: 201 XXXXXIKDSDRKRKLDFEEVKI--PELDEVDEKSFEKVEKIIQAGQLEKLKIDQCK 362
                 K+ D     D ++V+I  P LDE DEKSFE V+K+I+AGQLEKLK+DQCK
Sbjct: 57  KSRIQ-KEMDMGFVEDLDDVEIVAPVLDEKDEKSFEMVQKMIEAGQLEKLKVDQCK 111


Top