BLASTX nr result

ID: Cimicifuga21_contig00032716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032716
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45348.1| unknown [Medicago truncatula]                          168   5e-40
ref|XP_003606844.1| Transmembrane protein 45B [Medicago truncatu...   166   2e-39
gb|ACJ83343.1| unknown [Medicago truncatula]                          163   1e-38
emb|CAN63047.1| hypothetical protein VITISV_044031 [Vitis vinifera]   157   1e-36
gb|AFK44683.1| unknown [Lotus japonicus]                              156   1e-36

>gb|AFK45348.1| unknown [Medicago truncatula]
          Length = 293

 Score =  168 bits (425), Expect = 5e-40
 Identities = 85/166 (51%), Positives = 104/166 (62%)
 Frame = +1

Query: 1   GVWHTFNIIQAYYLKGKSHFRARLWYPFTLFSFKFKYLEXXXXXXXXXXXXTMQLLDFYN 180
           G+WH  NII++Y +KG S+F  R WY F    FKFK+LE             MQ+LDF +
Sbjct: 18  GLWHIINIIKSYLVKGPSNFTIRFWYHFNTPHFKFKHLELVSILSFSILAILMQILDFPH 77

Query: 181 HEFSFMLDNLEHATMFFHLAIYACVALVIELTHVPETFTWFLGILVASVFSQELFLLHFH 360
             ++F LDN EHATMF HLA++A  +L+ ELT   E F+ F+ ILV+SVFSQELFLLHFH
Sbjct: 78  FHYAFKLDNFEHATMFIHLALFAGFSLLTELTDSLELFSGFVAILVSSVFSQELFLLHFH 137

Query: 361 STDHVGLEGHYHWXXXXXXXXXXXXXXXMASFPNSVLPAFVLSVSV 498
           STDHVG EGHYHW                A FPNS   A VLS+S+
Sbjct: 138 STDHVGPEGHYHWLLQLIVFVSLIASLAAAVFPNSFNAAIVLSISL 183


>ref|XP_003606844.1| Transmembrane protein 45B [Medicago truncatula]
           gi|355507899|gb|AES89041.1| Transmembrane protein 45B
           [Medicago truncatula]
          Length = 293

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/166 (50%), Positives = 103/166 (62%)
 Frame = +1

Query: 1   GVWHTFNIIQAYYLKGKSHFRARLWYPFTLFSFKFKYLEXXXXXXXXXXXXTMQLLDFYN 180
           G+WH  N I++Y +KG S+F  R WY F    FKFK+LE             MQ+LDF +
Sbjct: 18  GLWHIINTIKSYLVKGPSNFTIRFWYHFNTPHFKFKHLELVSILSFSILAILMQILDFPH 77

Query: 181 HEFSFMLDNLEHATMFFHLAIYACVALVIELTHVPETFTWFLGILVASVFSQELFLLHFH 360
             ++F LDN EHATMF HLA++A  +L+ ELT   E F+ F+ ILV+SVFSQELFLLHFH
Sbjct: 78  FHYAFKLDNFEHATMFIHLALFAGFSLLTELTDSLELFSGFVAILVSSVFSQELFLLHFH 137

Query: 361 STDHVGLEGHYHWXXXXXXXXXXXXXXXMASFPNSVLPAFVLSVSV 498
           STDHVG EGHYHW                A FPNS   A VLS+S+
Sbjct: 138 STDHVGPEGHYHWLLQLIVFVSLIASLAAAVFPNSFNAAIVLSISL 183


>gb|ACJ83343.1| unknown [Medicago truncatula]
          Length = 204

 Score =  163 bits (413), Expect = 1e-38
 Identities = 83/166 (50%), Positives = 102/166 (61%)
 Frame = +1

Query: 1   GVWHTFNIIQAYYLKGKSHFRARLWYPFTLFSFKFKYLEXXXXXXXXXXXXTMQLLDFYN 180
           G+WH  N I++Y +KG S+F  R WY F    FKFK+LE             MQ+LDF +
Sbjct: 18  GLWHIINTIKSYLVKGPSNFTIRFWYHFNTPHFKFKHLELVSILSFSILAILMQILDFPH 77

Query: 181 HEFSFMLDNLEHATMFFHLAIYACVALVIELTHVPETFTWFLGILVASVFSQELFLLHFH 360
             ++F LDN EHATMF HLA++A  +L+  LT   E F+ F+ ILV+SVFSQELFLLHFH
Sbjct: 78  FHYAFKLDNFEHATMFIHLALFAGFSLLTGLTDSLELFSGFVAILVSSVFSQELFLLHFH 137

Query: 361 STDHVGLEGHYHWXXXXXXXXXXXXXXXMASFPNSVLPAFVLSVSV 498
           STDHVG EGHYHW                A FPNS   A VLS+S+
Sbjct: 138 STDHVGPEGHYHWLLQLIVFVSLIASLAAAVFPNSFNAAIVLSISL 183


>emb|CAN63047.1| hypothetical protein VITISV_044031 [Vitis vinifera]
          Length = 294

 Score =  157 bits (396), Expect = 1e-36
 Identities = 84/166 (50%), Positives = 94/166 (56%)
 Frame = +1

Query: 1   GVWHTFNIIQAYYLKGKSHFRARLWYPFTLFSFKFKYLEXXXXXXXXXXXXTMQLLDFYN 180
           G+WHT N I+AY LKG ++F  + WYPF       KYLE             MQ+LDF  
Sbjct: 18  GLWHTINTIRAYALKGSTNFTVKFWYPFNSPFPNLKYLELIFILFFSIFAIFMQVLDFPF 77

Query: 181 HEFSFMLDNLEHATMFFHLAIYACVALVIELTHVPETFTWFLGILVASVFSQELFLLHFH 360
              SF LDN EHA+MF HLAI+A   L  ELTH  E  +   GIL ASVF QELFLLHFH
Sbjct: 78  IRLSFELDNFEHASMFLHLAIFAGFTLSAELTHSLEGLSGVSGILAASVFGQELFLLHFH 137

Query: 361 STDHVGLEGHYHWXXXXXXXXXXXXXXXMASFPNSVLPAFVLSVSV 498
           STDHVGLEGHYHW                 SFP S   A VLS +V
Sbjct: 138 STDHVGLEGHYHWLLQLIVLVSLVAALAATSFPTSFPAALVLSTAV 183


>gb|AFK44683.1| unknown [Lotus japonicus]
          Length = 293

 Score =  156 bits (395), Expect = 1e-36
 Identities = 78/166 (46%), Positives = 100/166 (60%)
 Frame = +1

Query: 1   GVWHTFNIIQAYYLKGKSHFRARLWYPFTLFSFKFKYLEXXXXXXXXXXXXTMQLLDFYN 180
           G+WHT N I++Y +KG ++F  R W+ F     + K+LE              Q+LDF N
Sbjct: 18  GLWHTINTIKSYLVKGPANFTVRFWFQFNTPLARLKHLELVSILCFSILAIFTQILDFPN 77

Query: 181 HEFSFMLDNLEHATMFFHLAIYACVALVIELTHVPETFTWFLGILVASVFSQELFLLHFH 360
             ++F L N EHATMF HLA++A  +L IELT   + F+ F+GIL +S+FSQELFLLHFH
Sbjct: 78  FHYAFKLHNFEHATMFIHLALFAGFSLSIELTDSLDIFSGFVGILASSMFSQELFLLHFH 137

Query: 361 STDHVGLEGHYHWXXXXXXXXXXXXXXXMASFPNSVLPAFVLSVSV 498
           STDHVGLEGHYHW                A FP S   A VLS+S+
Sbjct: 138 STDHVGLEGHYHWLLQLIVIVSLVSAMAAAIFPQSFNAALVLSISI 183