BLASTX nr result
ID: Cimicifuga21_contig00032708
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00032708
(758 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat... 403 e-110
ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat... 370 e-100
ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat... 357 1e-96
ref|NP_001031987.1| pentatricopeptide repeat-containing protein ... 350 1e-94
ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arab... 345 8e-93
>ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 403 bits (1036), Expect = e-110
Identities = 191/252 (75%), Positives = 219/252 (86%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
AKCG+M KAMEVFW M+E+NVYTWS G +C+ELFSLMKQ+ VQPNE+TF+
Sbjct: 289 AKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFV 348
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
SVLRGCSVVGLVEEGR+HFESM +VY +EP+LEHYGCMVDLYGRAG L++AL FIN+MP+
Sbjct: 349 SVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPV 408
Query: 397 KPHVGAWGALLSACKIHGNMKLGELALRNLVKLEAKNDGAYVLLSNIYADSRDWDGASNV 218
+PHVGAWGALL+ACKI+ NM++GELA R +V+LEAKN GAYVLLSNIYADS+DWD SNV
Sbjct: 409 RPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNV 468
Query: 217 RQLMKAKGVKKVPGCSVIEVGGEVHEFFVGDKSHPRYSEIEVMLDEIVRRLRLSGYVANT 38
RQ M KGV+K PGCSVIEVGGEVHEFFVGDKSHPRY+EI+VML EI RRL+LSGYVANT
Sbjct: 469 RQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANT 528
Query: 37 NPVLFDINEEEK 2
NPV FDI EEEK
Sbjct: 529 NPVFFDIEEEEK 540
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/138 (29%), Positives = 73/138 (52%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
AK GD+G A ++F +M ++ W+ RE + LF+LM++EGV+ NEV+ +
Sbjct: 188 AKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMV 247
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
SVL CS +G +++GR +++ L L ++D+Y + G + A+E M
Sbjct: 248 SVLSACSHLGALDQGRWAHAYIER-NKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKE 306
Query: 397 KPHVGAWGALLSACKIHG 344
K +V W + + ++G
Sbjct: 307 K-NVYTWSSAIGGLAMNG 323
>ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 370 bits (949), Expect = e-100
Identities = 176/252 (69%), Positives = 212/252 (84%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
AKCG++ +AM+VFW M+ERNVYTWS G E ++LF+ MK+EGVQPN +TFI
Sbjct: 290 AKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFI 349
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
SVL+GCSVVGLVEEGR+HF+SM+ VY + PQLEHYG MVD+YGRAGRL++AL FIN+MPM
Sbjct: 350 SVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPM 409
Query: 397 KPHVGAWGALLSACKIHGNMKLGELALRNLVKLEAKNDGAYVLLSNIYADSRDWDGASNV 218
+PHVGAW ALL AC+++ N +LGE+A R +V+LE KNDGAYVLLSNIYAD ++W+ S++
Sbjct: 410 RPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSL 469
Query: 217 RQLMKAKGVKKVPGCSVIEVGGEVHEFFVGDKSHPRYSEIEVMLDEIVRRLRLSGYVANT 38
RQ MKAKGVKK+PGCSVIEV GEVHEF VGDKSHPRY EIE+ L+EI + LRLSGYVANT
Sbjct: 470 RQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANT 529
Query: 37 NPVLFDINEEEK 2
NPVLFDI EEEK
Sbjct: 530 NPVLFDIEEEEK 541
Score = 66.6 bits (161), Expect = 5e-09
Identities = 38/138 (27%), Positives = 72/138 (52%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
AKCGD+ A ++F M ER+ TW+ RE +++F LM+ EGV+ NEV+ +
Sbjct: 189 AKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMV 248
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
VL C+ + +++ G R + + Y + + +VD+Y + G ++ A++ M
Sbjct: 249 LVLSACTHLQVLDHG-RWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKE 307
Query: 397 KPHVGAWGALLSACKIHG 344
+ +V W + + ++G
Sbjct: 308 R-NVYTWSSAIGGLAMNG 324
>ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 357 bits (917), Expect = 1e-96
Identities = 166/251 (66%), Positives = 204/251 (81%)
Frame = -2
Query: 754 KCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFIS 575
KCG++ +A++VFW M E+NVYTWS G++C+ELFS MK EG+ PNE+TFIS
Sbjct: 289 KCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFIS 348
Query: 574 VLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPMK 395
VL+GCSVVG V+EGR HF+SMK+ + +EP+LEHYGCMVDLYGRAGRLE+AL FIN MP+K
Sbjct: 349 VLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLK 408
Query: 394 PHVGAWGALLSACKIHGNMKLGELALRNLVKLEAKNDGAYVLLSNIYADSRDWDGASNVR 215
PH GAWGALL+AC+++ NM+LGE A R L+++E KN GAYV LSNIYAD+ +WD SNVR
Sbjct: 409 PHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVR 468
Query: 214 QLMKAKGVKKVPGCSVIEVGGEVHEFFVGDKSHPRYSEIEVMLDEIVRRLRLSGYVANTN 35
Q MKA+G+ K+PGCSV+EV GEVHEFF GDKSHP Y IE M EI +RL+L+GYVA+TN
Sbjct: 469 QSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTN 528
Query: 34 PVLFDINEEEK 2
VLFDI EEEK
Sbjct: 529 SVLFDIEEEEK 539
Score = 68.2 bits (165), Expect = 2e-09
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
AKCGD+G A +F M +R+ +W+ RE + LF LM+ +GV+ NEV+ I
Sbjct: 187 AKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMI 246
Query: 577 SVLRGCSVVGLVEEGR---RHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINN 407
SV+ C+ +G +++G+ + E K ++ + +VD+Y + G ++ AL+
Sbjct: 247 SVVTACTHLGALDQGKWAHAYIEKNK----IQMTVNLGTALVDMYFKCGNVDRALKVFWE 302
Query: 406 MPMKPHVGAWGALLSACKIHG 344
M K +V W + ++G
Sbjct: 303 MNEK-NVYTWSTAIGGLAMNG 322
>ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing protein
At5g40405 gi|10178152|dbj|BAB11597.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 350 bits (899), Expect = 1e-94
Identities = 164/252 (65%), Positives = 201/252 (79%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
AKCGDM KAMEVFW M E+NVYTWS G +C+ELFSLMKQ+GV PN VTF+
Sbjct: 286 AKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFV 345
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
SVLRGCSVVG V+EG+RHF+SM+ + +EPQLEHYGC+VDLY RAGRLEDA+ I MPM
Sbjct: 346 SVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
Query: 397 KPHVGAWGALLSACKIHGNMKLGELALRNLVKLEAKNDGAYVLLSNIYADSRDWDGASNV 218
KPH W +LL A +++ N++LG LA + +++LE N GAYVLLSNIYADS DWD S+V
Sbjct: 406 KPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHV 465
Query: 217 RQLMKAKGVKKVPGCSVIEVGGEVHEFFVGDKSHPRYSEIEVMLDEIVRRLRLSGYVANT 38
RQ MK+KGV+K PGCSV+EV GEVHEFFVGDKSHP+Y++I+ + +I RRLRL+GY A+T
Sbjct: 466 RQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADT 525
Query: 37 NPVLFDINEEEK 2
PV+FDI+EEEK
Sbjct: 526 TPVMFDIDEEEK 537
Score = 69.3 bits (168), Expect = 8e-10
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
A+CGD+ A ++F M ER+ W+ RE + +F LM+ EGV+ N V I
Sbjct: 185 ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMI 244
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
SVL C+ +G +++G R S + ++ + +VDLY + G +E A+E M
Sbjct: 245 SVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 397 KPHVGAWGALLSACKIHGNMKLGE--LALRNLVKLEAKNDGAYVLLS 263
K +V W + L+ ++G GE L L +L+K + A +S
Sbjct: 304 K-NVYTWSSALNGLAMNG---FGEKCLELFSLMKQDGVTPNAVTFVS 346
>ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata] gi|297316544|gb|EFH46967.1| hypothetical protein
ARALYDRAFT_493946 [Arabidopsis lyrata subsp. lyrata]
Length = 1111
Score = 345 bits (884), Expect = 8e-93
Identities = 161/252 (63%), Positives = 200/252 (79%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
AKCGDM KAMEVFW M E+NVYTWS G +C++LFSLMKQ+GV PN VTF+
Sbjct: 294 AKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFV 353
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
SVLRGCSVVG V+EG++HF+SM+ + +EPQL+HYGC+VDLY RAGRLEDA+ I MPM
Sbjct: 354 SVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPM 413
Query: 397 KPHVGAWGALLSACKIHGNMKLGELALRNLVKLEAKNDGAYVLLSNIYADSRDWDGASNV 218
K H W +LL A +++ N++LG LA + +++LE N GAYVLLSNIYADS DWD S+V
Sbjct: 414 KAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHV 473
Query: 217 RQLMKAKGVKKVPGCSVIEVGGEVHEFFVGDKSHPRYSEIEVMLDEIVRRLRLSGYVANT 38
RQ MK+KGV+K PGCSV+EV GEVHEFFVGDKSHP+Y+EI+ + +I RRLRL+GY A+T
Sbjct: 474 RQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADT 533
Query: 37 NPVLFDINEEEK 2
PV+FDI+EEEK
Sbjct: 534 TPVMFDIDEEEK 545
Score = 204 bits (518), Expect = 2e-50
Identities = 106/253 (41%), Positives = 154/253 (60%), Gaps = 1/253 (0%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
AK G + + VF + + W+ GR+ I+ F LM G+ P+ VTF
Sbjct: 784 AKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFT 843
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
+L CS GLVEEGR +FE+M + Y +EP+L+HY CMVDL GR+G L+DA I MPM
Sbjct: 844 HLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPM 903
Query: 397 KPHVGAWGALLSACKIHGNMKLGELALRNLVKLEAKNDGAYVLLSNIYADSRDWDGASNV 218
+P G WGALL AC+++ + +LG A + L +LE ++ Y++LSNIY+ S W AS +
Sbjct: 904 EPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRI 963
Query: 217 RQLMKAKGVKKVPGCSVIEVGGEVHEFFVGDKSHPRYSEIEVMLDEIVRRLRLS-GYVAN 41
R LMK KG+ + G S IE G ++H+F VGD SHP +I+ L EI ++++ G+ +
Sbjct: 964 RNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSR 1023
Query: 40 TNPVLFDINEEEK 2
T VL D++E+ K
Sbjct: 1024 TEFVLHDVDEDVK 1036
Score = 69.3 bits (168), Expect = 8e-10
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = -2
Query: 757 AKCGDMGKAMEVFWRMRERNVYTWSXXXXXXXXXXXGRECIELFSLMKQEGVQPNEVTFI 578
A+CGD+ A ++F M E++ W+ RE + LF LM+ EGV+ N V+ I
Sbjct: 193 ARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMI 252
Query: 577 SVLRGCSVVGLVEEGRRHFESMKQVYALEPQLEHYGCMVDLYGRAGRLEDALEFINNMPM 398
SVL C+ +G +++G R S + ++ + +VDLY + G ++ A+E M
Sbjct: 253 SVLSACTQLGALDQG-RWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEE 311
Query: 397 KPHVGAWGALLSACKIHGNMKLGE--LALRNLVKLEAKNDGAYVLLS 263
K +V W + L+ ++G GE L L +L+K + A +S
Sbjct: 312 K-NVYTWSSALNGLAMNG---FGEKCLKLFSLMKQDGVTPNAVTFVS 354