BLASTX nr result

ID: Cimicifuga21_contig00032707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032707
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164072.1| PREDICTED: ABC transporter G family member 3...   241   4e-62
ref|XP_004143306.1| PREDICTED: ABC transporter G family member 3...   241   6e-62
emb|CBI17066.3| unnamed protein product [Vitis vinifera]              240   8e-62
ref|XP_002529080.1| ATP-binding cassette transporter, putative [...   240   1e-61
emb|CAN83834.1| hypothetical protein VITISV_006821 [Vitis vinifera]   240   1e-61

>ref|XP_004164072.1| PREDICTED: ABC transporter G family member 39-like [Cucumis sativus]
          Length = 1455

 Score =  241 bits (615), Expect = 4e-62
 Identities = 120/155 (77%), Positives = 131/155 (84%)
 Frame = +3

Query: 18   RGIQMTPRRAPYTPDISVSRVNVGEQLQGRGMVLPFQPLSLAFNHVNYYVDMPAEMKIHG 197
            RGIQM P +       S +  N     + +GMVLPFQPLSLAFNHVNYYVDMPAEMK  G
Sbjct: 821  RGIQMQPIK-------SSNAANNSNSTEKKGMVLPFQPLSLAFNHVNYYVDMPAEMKSQG 873

Query: 198  IEESRLQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYVEGSINISGYPKN 377
            I++ RLQLL+DVSG FRPG+LTALVGVSGAGKTTLMDVLAGRKTGGY+EGSINISGYPKN
Sbjct: 874  IDDDRLQLLRDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKN 933

Query: 378  QSTFARVSGYCEQNDIHSPRVTVYESLLYSAWLRL 482
            Q TFARVSGYCEQNDIHSP +TVYES+LYSAWLRL
Sbjct: 934  QETFARVSGYCEQNDIHSPHLTVYESVLYSAWLRL 968



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +3

Query: 210 RLQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYVE-GSINISGYPKNQST 386
           ++Q+L+D+SG+ +P  +T L+G   +GKTT +  LAG+      E G I   G+   +  
Sbjct: 182 KIQILKDISGIVKPSRMTLLLGPPSSGKTTFLRALAGKLENNLKETGKITYCGHEFKEFV 241

Query: 387 FARVSGYCEQNDIHSPRVTVYESLLYS 467
             R S Y  Q+D+H+  +TV E+  +S
Sbjct: 242 PQRTSAYISQHDLHNWEMTVRETFDFS 268


>ref|XP_004143306.1| PREDICTED: ABC transporter G family member 39-like [Cucumis sativus]
          Length = 1455

 Score =  241 bits (614), Expect = 6e-62
 Identities = 120/155 (77%), Positives = 131/155 (84%)
 Frame = +3

Query: 18   RGIQMTPRRAPYTPDISVSRVNVGEQLQGRGMVLPFQPLSLAFNHVNYYVDMPAEMKIHG 197
            RGIQM P +       S +  N     + +GMVLPFQPLSLAFNHVNYYVDMPAEMK  G
Sbjct: 821  RGIQMQPIK-------SSNAANNSNSTKKKGMVLPFQPLSLAFNHVNYYVDMPAEMKSQG 873

Query: 198  IEESRLQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYVEGSINISGYPKN 377
            I++ RLQLL+DVSG FRPG+LTALVGVSGAGKTTLMDVLAGRKTGGY+EGSINISGYPKN
Sbjct: 874  IDDDRLQLLRDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKN 933

Query: 378  QSTFARVSGYCEQNDIHSPRVTVYESLLYSAWLRL 482
            Q TFARVSGYCEQNDIHSP +TVYES+LYSAWLRL
Sbjct: 934  QETFARVSGYCEQNDIHSPHLTVYESVLYSAWLRL 968



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +3

Query: 210 RLQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYVE-GSINISGYPKNQST 386
           ++Q+L+D+SG+ +P  +T L+G   +GKTT +  LAG+      E G I   G+   +  
Sbjct: 182 KIQILKDISGIVKPSRMTLLLGPPSSGKTTFLRALAGKLENNLKETGKITYCGHEFKEFV 241

Query: 387 FARVSGYCEQNDIHSPRVTVYESLLYS 467
             R S Y  Q+D+H+  +TV E+  +S
Sbjct: 242 PQRTSAYISQHDLHNWEMTVRETFDFS 268


>emb|CBI17066.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  240 bits (613), Expect = 8e-62
 Identities = 121/154 (78%), Positives = 132/154 (85%)
 Frame = +3

Query: 21   GIQMTPRRAPYTPDISVSRVNVGEQLQGRGMVLPFQPLSLAFNHVNYYVDMPAEMKIHGI 200
            GI M  R A      ++S  + G +   +GMVLPFQPLSLAF+HVNYYVDMPAEMK  G+
Sbjct: 751  GIDMAVRNAQGDSSAAISAADNGSR---KGMVLPFQPLSLAFSHVNYYVDMPAEMKSEGV 807

Query: 201  EESRLQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYVEGSINISGYPKNQ 380
            EE RLQLL+DVSG FRPGILTALVGVSGAGKTTLMDVLAGRKTGGY+EGSI+ISGYPKNQ
Sbjct: 808  EEDRLQLLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQ 867

Query: 381  STFARVSGYCEQNDIHSPRVTVYESLLYSAWLRL 482
            +TFARVSGYCEQNDIHSP VTVYESLLYSAWLRL
Sbjct: 868  ATFARVSGYCEQNDIHSPYVTVYESLLYSAWLRL 901



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +3

Query: 213 LQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGY-VEGSINISGYPKNQSTF 389
           +++LQDVSG+ RP  +T L+G   +GKTT +  L+G       + G I   G+  ++   
Sbjct: 214 VKILQDVSGIIRPSRMTLLLGPPASGKTTFLKALSGEPDDNLRITGKITYCGHEFSEFVP 273

Query: 390 ARVSGYCEQNDIHSPRVTVYESLLYS 467
            R   Y  Q+D+H   +TV E+L +S
Sbjct: 274 QRTCAYISQHDLHYGEMTVRETLDFS 299


>ref|XP_002529080.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223531492|gb|EEF33324.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1444

 Score =  240 bits (612), Expect = 1e-61
 Identities = 115/126 (91%), Positives = 122/126 (96%)
 Frame = +3

Query: 105  RGMVLPFQPLSLAFNHVNYYVDMPAEMKIHGIEESRLQLLQDVSGVFRPGILTALVGVSG 284
            +GMVLPFQPLSLAFNHVNYYVDMPAEMK HG+EESRLQLL+DVSG FRPG LTALVGVSG
Sbjct: 832  KGMVLPFQPLSLAFNHVNYYVDMPAEMKTHGVEESRLQLLRDVSGAFRPGTLTALVGVSG 891

Query: 285  AGKTTLMDVLAGRKTGGYVEGSINISGYPKNQSTFARVSGYCEQNDIHSPRVTVYESLLY 464
            AGKTTLMDVLAGRKTGGY+EGSI+ISGYPKNQ+TFAR+SGYCEQNDIHSP VTVYESLLY
Sbjct: 892  AGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPYVTVYESLLY 951

Query: 465  SAWLRL 482
            SAWLRL
Sbjct: 952  SAWLRL 957



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +3

Query: 213 LQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGY-VEGSINISGYPKNQSTF 389
           +++L+DVSG+ +P  +  L+G  G+GKTTL+  LAG+      V G +   G+  ++   
Sbjct: 184 IEILKDVSGIVKPSRIALLLGPPGSGKTTLLKALAGKLEDHLRVSGKVTFCGHEFSEFIA 243

Query: 390 ARVSGYCEQNDIHSPRVTVYESLLYS 467
            R   Y  Q+D+H   +TV E+L +S
Sbjct: 244 QRTCAYISQHDLHCGEMTVRETLDFS 269


>emb|CAN83834.1| hypothetical protein VITISV_006821 [Vitis vinifera]
          Length = 1454

 Score =  240 bits (612), Expect = 1e-61
 Identities = 121/154 (78%), Positives = 132/154 (85%)
 Frame = +3

Query: 21   GIQMTPRRAPYTPDISVSRVNVGEQLQGRGMVLPFQPLSLAFNHVNYYVDMPAEMKIHGI 200
            GI M  R A      ++S  + G +   +GMVLPFQPLSLAF+HVNYYVDMPAEMK  G+
Sbjct: 817  GIDMAVRNAQGDSSSAISAADNGSR---KGMVLPFQPLSLAFSHVNYYVDMPAEMKSEGV 873

Query: 201  EESRLQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYVEGSINISGYPKNQ 380
            EE RLQLL+DVSG FRPGILTALVGVSGAGKTTLMDVLAGRKTGGY+EGSI+ISGYPKNQ
Sbjct: 874  EEDRLQLLRDVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQ 933

Query: 381  STFARVSGYCEQNDIHSPRVTVYESLLYSAWLRL 482
            +TFARVSGYCEQNDIHSP VTVYESLLYSAWLRL
Sbjct: 934  ATFARVSGYCEQNDIHSPYVTVYESLLYSAWLRL 967



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +3

Query: 213 LQLLQDVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGY-VEGSINISGYPKNQSTF 389
           +++LQDVSG+ RP  +T L+G   +GKTT +  L+G       + G I   G+  ++   
Sbjct: 179 VKILQDVSGIIRPSRMTLLLGPPASGKTTFLKALSGEPDDNLRITGKITYCGHEFSEFVP 238

Query: 390 ARVSGYCEQNDIHSPRVTVYESLLYS 467
            R   Y  Q+D+H   +TV E+L +S
Sbjct: 239 QRTCAYISQHDLHYGEMTVRETLDFS 264


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