BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032703
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...   102   2e-20
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   102   2e-20
ref|XP_002333684.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002530005.1| pentatricopeptide repeat-containing protein,...    77   2e-12

>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  111 bits (278), Expect = 5e-23
 Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
 Frame = +2

Query: 68  SKSPANLHHITFNH--HPNPHQPFSSSAESIKSLLKSCSTKTHLLQIHTQIIKT-LLQHP 238
           S S A+ +H    H  HP P     S  + I SL+KSCS KTHLLQIH  II+T L+Q+ 
Sbjct: 42  SPSTASENHRRLQHQTHPLPKSRDESENQLI-SLIKSCSKKTHLLQIHAHIIRTSLIQNH 100

Query: 239 IVLLDFLSRASFAPLRDLKYSHRFFTQIPNPTSSHYNTMIRAYSKSDSPVEGVKLYSQMR 418
            + L FLSRA+ +P RD+ YS + F+QI  P+ S YN MIRAYS S SP +G  LY +MR
Sbjct: 101 FISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMR 160

Query: 419 ERGI 430
            RG+
Sbjct: 161 RRGV 164


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score =  102 bits (255), Expect = 2e-20
 Identities = 62/140 (44%), Positives = 80/140 (57%), Gaps = 3/140 (2%)
 Frame = +2

Query: 20  RSPT--NLKQHHYILFFSSKSPANLHHITFNHHPNPHQPFSSSAESIKSLLKSCSTKTHL 193
           RSP+  +LK HH             H I+F+H            E + SL+KSC+ K+ L
Sbjct: 6   RSPSILSLKYHH-------------HSISFSHFER---------EPLISLIKSCTHKSQL 43

Query: 194 LQIHTQIIKTL-LQHPIVLLDFLSRASFAPLRDLKYSHRFFTQIPNPTSSHYNTMIRAYS 370
           LQIH  II T  +Q PIV L FL+R + AP RDL YS R F  + NP  SHYN M+RAYS
Sbjct: 44  LQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYS 103

Query: 371 KSDSPVEGVKLYSQMRERGI 430
            S SP+EG+ +Y  M  +G+
Sbjct: 104 LSRSPLEGLYMYRDMERQGV 123


>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
 Frame = +2

Query: 146 ESIKSLLKSCSTKTHLLQIHTQIIKT-LLQHPIVLLDFLSRASFA-PLRDLKYSHRFFTQ 319
           E++ S +KS S KT LLQIH  II+T L+Q+P V L FLSR + + PL+D  YS RFF Q
Sbjct: 4   ETVISAIKSVSHKTRLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQ 63

Query: 320 IPNPTSSHYNTMIRAYSKSDSPVEGVKLYSQMRERGI 430
           + +P  SHYNTMIRA S SDSP +G+ LY  MR RGI
Sbjct: 64  LSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGI 100


>ref|XP_002333684.1| predicted protein [Populus trichocarpa] gi|222838021|gb|EEE76386.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
 Frame = +2

Query: 107 HHPNPHQ--PFSSSAESIKSLLKSCSTKTHLLQIHTQ-IIKTLLQHPIVLLDFLSRASFA 277
           H PN  Q  P  + A ++ S+ ++C++ + L QIH   ++  L  H I+L   L  A+ +
Sbjct: 2   HPPNNQQCKPILTLASTLISMAEACNSMSRLKQIHAHSLLAGLHDHSIILAKMLRFAAVS 61

Query: 278 PLRDLKYSHRFFTQIPNPTSSHYNTMIRAYSKSDSPVEGVKLYSQMRERGI 430
           P  DL Y+ R F Q+P+P +  YNT+IR Y+KS  P   + L +QMR+ G+
Sbjct: 62  PSGDLAYAQRLFDQLPHPNTFFYNTLIRGYAKSSIPSYSLHLVNQMRQNGV 112


>ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530484|gb|EEF32367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 499

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +2

Query: 125 QPFSSSAESIKSLLKSCSTKTHLLQIHTQIIKT-LLQHPIVLLDFLSRASFAPLRDLKYS 301
           +P  + A  + S+ ++C +  HL QIH   + T L  H ++L   L  A+ +P  DL Y+
Sbjct: 10  KPILALASILASIAENCQSMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYA 69

Query: 302 HRFFTQIPNPTSSHYNTMIRAYSKSDSPVEGVKLYSQMRERGI 430
            R F Q+P P +  YNT+IR Y+KS SP   V L++QMR+  +
Sbjct: 70  QRLFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHV 112