BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032697
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
emb|CBI32989.3| unnamed protein product [Vitis vinifera]               72   5e-11
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]    71   1e-10
ref|XP_002892652.1| pentatricopeptide repeat-containing protein ...    62   5e-08
ref|NP_564786.1| pentatricopeptide repeat-containing protein [Ar...    60   2e-07

>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Vitis vinifera]
          Length = 396

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +2

Query: 179 LVKSLLQGGEFKTALRACKDCMEKGWIQDIISSDIFTMETLLS--ASISKVQEARGLVRK 352
           LV  L QGG+F++ALR CK+CMEKGW       +I TM +L++   SISKV+EAR L+ +
Sbjct: 321 LVYFLCQGGDFESALRFCKECMEKGWF-----PNISTMTSLVNGLVSISKVEEARELIGQ 375

Query: 353 MNERFTRNAHMWKEI 397
           + E+F+RN   W EI
Sbjct: 376 IKEKFSRNVDKWNEI 390


>emb|CBI32989.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +2

Query: 179 LVKSLLQGGEFKTALRACKDCMEKGWIQDIISSDIFTMETLLS--ASISKVQEARGLVRK 352
           LV  L QGG+F++ALR CK+CMEKGW       +I TM +L++   SISKV+EAR L+ +
Sbjct: 337 LVYFLCQGGDFESALRFCKECMEKGWF-----PNISTMTSLVNGLVSISKVEEARELIGQ 391

Query: 353 MNERFTRNAHMWKEI 397
           + E+F+RN   W EI
Sbjct: 392 IKEKFSRNVDKWNEI 406


>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
          Length = 396

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +2

Query: 179 LVKSLLQGGEFKTALRACKDCMEKGWIQDIISSDIFTMETLLS--ASISKVQEARGLVRK 352
           LV  L QGG+F++ALR CK+CMEKGW       +I TM +L++   SISKV+EA+ L+ +
Sbjct: 321 LVYFLCQGGDFESALRFCKECMEKGWF-----PNISTMTSLVNGLVSISKVEEAQELIGQ 375

Query: 353 MNERFTRNAHMWKEI 397
           + E+F+RN   W EI
Sbjct: 376 IKEKFSRNVDKWNEI 390


>ref|XP_002892652.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338494|gb|EFH68911.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 403

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = +2

Query: 179 LVKSLLQGGEFKTALRACKDCMEKGWIQDIISSDIFTMETLLS--ASISKVQEARGLVRK 352
           L++ L +GG+F+TAL  C++ MEK W+          M+ L++  AS+SKV EA+ L+ +
Sbjct: 328 LIRCLCKGGDFETALILCRESMEKNWVPSFS-----IMKWLVNGLASVSKVDEAKELIAQ 382

Query: 353 MNERFTRNAHMWKEI 397
           + E+FTRN  +W E+
Sbjct: 383 VKEKFTRNVDLWNEV 397


>ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g61870, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
           gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8
           [Arabidopsis thaliana] gi|3367521|gb|AAC28506.1| Similar
           to gb|U08285 membrane-associated salt-inducible protein
           from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
           come from this gene [Arabidopsis thaliana]
           gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis
           thaliana] gi|32815835|gb|AAP88326.1| At1g61870
           [Arabidopsis thaliana] gi|332195777|gb|AEE33898.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 408

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +2

Query: 179 LVKSLLQGGEFKTALRACKDCMEKGWIQDIISSDIFTMETLLS--ASISKVQEARGLVRK 352
           L+  L +GG+F+TAL  CK+ MEK W+          M++L++  A  SKV+EA+ L+ +
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWV-----PSFSIMKSLVNGLAKDSKVEEAKELIGQ 387

Query: 353 MNERFTRNAHMWKEI 397
           + E+FTRN  +W E+
Sbjct: 388 VKEKFTRNVELWNEV 402