BLASTX nr result

ID: Cimicifuga21_contig00032693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032693
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
emb|CBI16200.3| unnamed protein product [Vitis vinifera]               59   4e-07
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    58   7e-07

>ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Glycine max]
          Length = 449

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = +3

Query: 3   GLCEKGKLADACFVFEEMGKRNMEFHLEGWEALAGDTCVENKGSSELLTGL 155
           GL + G +  +CFV EEM KR +EF LE WE +    C ENKG+SEL+T L
Sbjct: 394 GLLKSGNIDGSCFVLEEMEKRKLEFDLESWETIIKSACSENKGASELMTVL 444


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/53 (50%), Positives = 35/53 (66%)
 Frame = +3

Query: 3   GLCEKGKLADACFVFEEMGKRNMEFHLEGWEALAGDTCVENKGSSELLTGLIT 161
           GL + GK+  ACFV EEM KR M FHLE WEAL  D C  ++G+  L+  L++
Sbjct: 446 GLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDRGAGGLVRELVS 498


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = +3

Query: 3   GLCEKGKLADACFVFEEMGKRNMEFHLEGWEALAGDTCVENKGSSELLTGL 155
           GL + GK+  ACFV EEM KR M FHLE WEAL  D C  ++G+  L+  L
Sbjct: 808 GLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDRGAGGLVREL 858


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   GLCEKGKLADACFVFEEMGKRNMEFHLEGWEALAGDTCVENKGSSEL 143
           GL + GK+  ACFV EEM KR M FHLE WEAL  D C  ++G+  L
Sbjct: 737 GLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDRGAGGL 783


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