BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032688
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|2...   208   6e-52
ref|XP_002515531.1| pentatricopeptide repeat-containing protein,...   204   9e-51
emb|CBI24015.3| unnamed protein product [Vitis vinifera]              200   2e-49
ref|XP_002517668.1| pentatricopeptide repeat-containing protein,...   200   2e-49
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...   199   4e-49

>ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|222854636|gb|EEE92183.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  208 bits (530), Expect = 6e-52
 Identities = 104/220 (47%), Positives = 147/220 (66%), Gaps = 7/220 (3%)
 Frame = -3

Query: 643 KACT---ELNQGKGVQSLILKSRGFGSDVYSNTSLVSFY----SSHGDLEYARKVFDRMQ 485
           KAC     LN GK V   ++K  GFG +V    +LV  Y       G +E+ARKVFD M 
Sbjct: 18  KACAGIGNLNLGKSVHGSVMKF-GFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMY 76

Query: 484 EKNVVSWTAMITGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKW 305
           + + VSW+AMI GY+++ R ++ + LF  MQI+G   +E+T+V+VL AC  LGA E+GKW
Sbjct: 77  KSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKW 136

Query: 304 VHGYIDKNKIFLNPTLATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLAMHGY 125
           V  Y++K ++  N  L+ AL+DM+ K G + KA+ +F ++  R++ +W S+IGGLAMHG 
Sbjct: 137 VESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGR 196

Query: 124 GVEALERFEQMQMSGTKPDAITLIGVLSACTHSGMVDKGK 5
           GVEA+  FE+M  SG  PD +  IG+LSAC+HSG+VDKGK
Sbjct: 197 GVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGK 236



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
 Frame = -3

Query: 373 NELTLVNVLCACANLGAFEMGKWVHGYIDKNKIFLNPTLATALVDMYV----KSGYIHKA 206
           N+ T   VL ACA +G   +GK VHG + K        +   LV MY       G I  A
Sbjct: 9   NKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFA 68

Query: 205 SQVFENVPHRSVYTWNSIIGGLAMHGYGVEALERFEQMQMSGTKPDAITLIGVLSACTHS 26
            +VF+ +      +W+++IGG    G   +A+  F +MQ+ G  PD IT++ VLSACT  
Sbjct: 69  RKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGL 128

Query: 25  GMVDKGK 5
           G ++ GK
Sbjct: 129 GALELGK 135


>ref|XP_002515531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545475|gb|EEF46980.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 397

 Score =  204 bits (520), Expect = 9e-51
 Identities = 106/219 (48%), Positives = 149/219 (68%), Gaps = 5/219 (2%)
 Frame = -3

Query: 643 KACTE---LNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGD-LEYARKVFDRMQEKN 476
           KAC     LN GK V   +LK  GF +DV+   ++V  Y    D +E+AR+VFD M +++
Sbjct: 144 KACAGIGYLNLGKSVHGSVLKF-GFDNDVHVQNTMVHMYCCGRDGIEFAREVFDEMCKRD 202

Query: 475 VVSWTAMITGYMKLKRYTEGLALFHRMQIEGA-EINELTLVNVLCACANLGAFEMGKWVH 299
            VSW+AMI GY +L R ++ + LF  MQIEG    +E+T+V+VL AC +LGA E+GKWV 
Sbjct: 203 PVSWSAMIGGYARLGRCSDAIDLFREMQIEGVCRPDEITMVSVLSACTDLGALELGKWVE 262

Query: 298 GYIDKNKIFLNPTLATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLAMHGYGV 119
            YI+K K+  +  L  AL+DM+ K G + KA ++F N+  R++ +W S+I GLAMHG G+
Sbjct: 263 SYIEKEKVQKSVELCNALIDMFAKCGDVDKAIKLFRNMKDRTIVSWTSVIAGLAMHGRGL 322

Query: 118 EALERFEQMQMSGTKPDAITLIGVLSACTHSGMVDKGKE 2
           EA+E FE+M  SG  PD +  IG+LSAC+HSG+VDKG+E
Sbjct: 323 EAVEFFEEMIKSGVLPDDVAFIGLLSACSHSGLVDKGRE 361



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 9/220 (4%)
 Frame = -3

Query: 637 CTELNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGDLEYARK-VFDRMQEKNVVS-- 467
           C   ++   + + ILK  G  ++    T   S  S+   ++YA   +F    +K +    
Sbjct: 42  CNTFSKLTQIHTQILKL-GLSNNPLVLTKYTSTSSNLHAIDYASSFIFSPESDKRLYDTF 100

Query: 466 -WTAMITGYMKLKRYTEGLAL-FHRMQIEGAEI-NELTLVNVLCACANLGAFEMGKWVHG 296
            +  +I  Y      ++G AL  +++ +E   + N+ T   VL ACA +G   +GK VHG
Sbjct: 101 LFNTIIRAYAHSNNVSKGKALCMYKLMLEYDVLPNKFTYPFVLKACAGIGYLNLGKSVHG 160

Query: 295 YIDKNKIFLNPTLATALVDMYV--KSGYIHKASQVFENVPHRSVYTWNSIIGGLAMHGYG 122
            + K     +  +   +V MY   + G I  A +VF+ +  R   +W+++IGG A  G  
Sbjct: 161 SVLKFGFDNDVHVQNTMVHMYCCGRDG-IEFAREVFDEMCKRDPVSWSAMIGGYARLGRC 219

Query: 121 VEALERFEQMQMSGT-KPDAITLIGVLSACTHSGMVDKGK 5
            +A++ F +MQ+ G  +PD IT++ VLSACT  G ++ GK
Sbjct: 220 SDAIDLFREMQIEGVCRPDEITMVSVLSACTDLGALELGK 259


>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  200 bits (509), Expect = 2e-49
 Identities = 96/210 (45%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
 Frame = -3

Query: 628 LNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGDLEYARKVFDRM--QEKNVVSWTAM 455
           + +GK + + +LK  GFG+D +S  +L+  Y +   LE AR+VFD M  +++N VSW AM
Sbjct: 110 IEEGKQIHAHVLKF-GFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAM 168

Query: 454 ITGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYIDKNKI 275
           I  Y++  R  E  ALF RM++E   +++    ++L AC  LGA E GKW+HGYI+K+ I
Sbjct: 169 IAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGI 228

Query: 274 FLNPTLATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLAMHGYGVEALERFEQ 95
            L+  LAT ++DMY K G + KAS+VF  +P + + +WN +IGGLAMHG G  A+E F++
Sbjct: 229 ELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKE 288

Query: 94  MQMSGTKPDAITLIGVLSACTHSGMVDKGK 5
           M+     PD IT + VLSAC HSG+V++GK
Sbjct: 289 MEREMVAPDGITFVNVLSACAHSGLVEEGK 318



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
 Frame = -3

Query: 640 ACT---ELNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGDLEYARKVFDRMQEKNVV 470
           ACT    L QGK +   I KS G   D    T+++  Y   G LE A +VF+ + +K + 
Sbjct: 206 ACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGIS 264

Query: 469 SWTAMITGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYI 290
           SW  MI G     +    + LF  M+ E    + +T VNVL ACA+ G  E GK    Y+
Sbjct: 265 SWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYM 324

Query: 289 DKNKIFLNPTLA--TALVDMYVKSGYIHKASQVFENVP-HRSVYTWNSIIGGLAMHG 128
            +  + L P +     +VD+  ++G + +A ++   +P +       +++G   +HG
Sbjct: 325 TE-VLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHG 380



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
 Frame = -3

Query: 451 TGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYIDKNKIF 272
           +GY++ +     + ++ RM  +    N+ T   ++ AC    A E GK +H ++ K    
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 271 LNPTLATALVDMYVKSGYIHKASQVFENVPH--RSVYTWNSIIGGLAMHGYGVEALERFE 98
            +      L+ MYV    + +A +VF+N+P   R+  +WN++I          EA   F+
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186

Query: 97  QMQMSGTKPDAITLIGVLSACTHSGMVDKGK 5
           +M++     D      +LSACT  G +++GK
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGK 217


>ref|XP_002517668.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543300|gb|EEF44832.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 512

 Score =  200 bits (508), Expect = 2e-49
 Identities = 99/212 (46%), Positives = 143/212 (67%)
 Frame = -3

Query: 640 ACTELNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGDLEYARKVFDRMQEKNVVSWT 461
           AC E++   G+    +KSR    DV S T++V+ +++ G L+ ARK FD+M E++ VSWT
Sbjct: 236 ACGEMSVALGIFES-MKSR----DVISWTAIVTGFANIGQLDIARKYFDQMPERDYVSWT 290

Query: 460 AMITGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYIDKN 281
           AMI GY+++  + E L LFH MQ    + +E T+V++L ACA LGA E+G+WV  YIDKN
Sbjct: 291 AMIDGYLQVNCFKEALVLFHEMQTSNVKPDEFTMVSILTACAQLGALELGEWVRTYIDKN 350

Query: 280 KIFLNPTLATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLAMHGYGVEALERF 101
           K+  +  +  AL+DMY K G + KA  +F ++P    +TW ++I GLA++GYG EAL+ F
Sbjct: 351 KVKNDAYVGNALIDMYFKCGNVEKARSIFNSMPRPDKFTWTAMIVGLAINGYGEEALDMF 410

Query: 100 EQMQMSGTKPDAITLIGVLSACTHSGMVDKGK 5
            QM  +   PD IT +GVL ACTH+GMVD+G+
Sbjct: 411 VQMLKASVTPDEITYVGVLCACTHTGMVDEGR 442



 Score =  125 bits (314), Expect = 7e-27
 Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 31/236 (13%)
 Frame = -3

Query: 619 GKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGDLEYARKVFDRMQEKNVVSWTAMITGYM 440
           GK +   ++K  G GS+V+   +L++ YS  G  + AR +FD   + +VV+W AMI+ Y 
Sbjct: 107 GKELHCHVVKY-GLGSNVFVQNALINMYSLCGLTDMARGIFDMSYKTDVVTWNAMISAYN 165

Query: 439 KLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYIDKNKIFLNPT 260
           ++K+Y +   LFH M+ +    + +TLV+VL AC+ L   E G+ VH YI  + +  N  
Sbjct: 166 RIKQYDKTKTLFHEMEKKRVLPSSVTLVSVLSACSKLKDLESGQKVHKYISDHVVQSNLI 225

Query: 259 LATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLA------------------- 137
           +  AL+DMY   G +  A  +FE++  R V +W +I+ G A                   
Sbjct: 226 VENALIDMYAACGEMSVALGIFESMKSRDVISWTAIVTGFANIGQLDIARKYFDQMPERD 285

Query: 136 -------MHGY-----GVEALERFEQMQMSGTKPDAITLIGVLSACTHSGMVDKGK 5
                  + GY       EAL  F +MQ S  KPD  T++ +L+AC   G ++ G+
Sbjct: 286 YVSWTAMIDGYLQVNCFKEALVLFHEMQTSNVKPDEFTMVSILTACAQLGALELGE 341



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
 Frame = -3

Query: 628 LNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSH--GDLEYARKVFDRMQEKNVVSWTAM 455
           ++Q K + S  +K+      +  N  + SF  +   GD+ YAR++FD + E  V  W  M
Sbjct: 1   MDQLKQIHSQTIKTGTICKPIIQN-KIFSFCCTQEFGDMNYARQLFDTIPEPTVFHWNTM 59

Query: 454 ITGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYIDKNKI 275
           + GY ++     G++++  M       +  T   ++       AFE GK +H ++ K  +
Sbjct: 60  LKGYSRIDSPKLGVSMYLDMLKNDVLPDCYTYPFLIKGFKKDIAFEYGKELHCHVVKYGL 119

Query: 274 FLNPTLATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLAMHGYGVEALERFEQ 95
             N  +  AL++MY   G    A  +F+      V TWN++I          +    F +
Sbjct: 120 GSNVFVQNALINMYSLCGLTDMARGIFDMSYKTDVVTWNAMISAYNRIKQYDKTKTLFHE 179

Query: 94  MQMSGTKPDAITLIGVLSACTHSGMVDKGKE 2
           M+     P ++TL+ VLSAC+    ++ G++
Sbjct: 180 MEKKRVLPSSVTLVSVLSACSKLKDLESGQK 210


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  199 bits (506), Expect = 4e-49
 Identities = 98/213 (46%), Positives = 145/213 (68%)
 Frame = -3

Query: 640 ACTELNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGDLEYARKVFDRMQEKNVVSWT 461
           AC +++   G+    +KSR    DV S T++V+ +++ G +  AR  FD+M E++ VSWT
Sbjct: 267 ACGDMDTALGIFDN-MKSR----DVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWT 321

Query: 460 AMITGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYIDKN 281
           AMI GY+++ R+ E L+LF  MQ    + +E T+V++L ACA+LGA E+G+W+  YIDKN
Sbjct: 322 AMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN 381

Query: 280 KIFLNPTLATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLAMHGYGVEALERF 101
           +I ++  +  AL+DMY   G + KA ++F  +PHR   +W ++I GLA++GYG EAL+ F
Sbjct: 382 EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMF 441

Query: 100 EQMQMSGTKPDAITLIGVLSACTHSGMVDKGKE 2
            QM  +   PD +T IGVL ACTHSGMVDKGK+
Sbjct: 442 SQMLKASITPDEVTCIGVLCACTHSGMVDKGKK 474



 Score =  127 bits (318), Expect = 2e-27
 Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 31/241 (12%)
 Frame = -3

Query: 634 TELNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGDLEYARKVFDRMQEKNVVSWTAM 455
           T +  G+ +   I+K  GF S+V+   +L+  YS  G++  AR VFDR  + +VV+W  M
Sbjct: 133 TAVKCGRELHDHIVKL-GFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVM 191

Query: 454 ITGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYIDKNKI 275
           I+GY + K++ E + LF  M+      + +TLV+VL AC+ L    +GK VH Y+   KI
Sbjct: 192 ISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKI 251

Query: 274 FLNPTLATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLA-------------- 137
                L  AL+DMY   G +  A  +F+N+  R V +W +I+ G                
Sbjct: 252 EPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDK 311

Query: 136 ------------MHGY-----GVEALERFEQMQMSGTKPDAITLIGVLSACTHSGMVDKG 8
                       + GY       E L  F +MQ +  KPD  T++ +L+AC H G ++ G
Sbjct: 312 MPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG 371

Query: 7   K 5
           +
Sbjct: 372 E 372



 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
 Frame = -3

Query: 643 KACTELNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSH--GDLEYARKVFDRMQEKNVV 470
           K C  + Q K + S  + + G  S+      +++F   H  GD+EYAR VFD M   N  
Sbjct: 27  KTCKSMAQLKQIHSQTICT-GLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHF 85

Query: 469 SWTAMITGYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYI 290
            W  MI GY ++      ++++  M   G   +E T   +L       A + G+ +H +I
Sbjct: 86  VWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHI 145

Query: 289 DKNKIFLNPTLATALVDMYVKSGYIHKASQVFENVPHRSVYTWNSIIGGLAMHGYGVEAL 110
            K     N  +  AL+ +Y  SG +  A  VF+      V TWN +I G        E++
Sbjct: 146 VKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESM 205

Query: 109 ERFEQMQMSGTKPDAITLIGVLSACTHSGMVDKGK 5
           + F++M+     P +ITL+ VLSAC+    ++ GK
Sbjct: 206 KLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGK 240



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
 Frame = -3

Query: 628 LNQGKGVQSLILKSRGFGSDVYSNTSLVSFYSSHGDLEYARKVFDRMQEKNVVSWTAMIT 449
           L  G+ +++ I K+     D +   +L+  Y + G++E A ++F+ M  ++ +SWTA+I 
Sbjct: 368 LELGEWIKAYIDKNE-IKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIF 426

Query: 448 GYMKLKRYTEGLALFHRMQIEGAEINELTLVNVLCACANLGAFEMGKWVHGYID-KNKIF 272
           G        E L +F +M       +E+T + VLCAC + G  + GK     +  ++ I 
Sbjct: 427 GLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIE 486

Query: 271 LNPTLATALVDMYVKSGYIHKASQVFENVPHR-SVYTWNSIIGGLAMH 131
            N      +VD+  ++G++ +A +V +N+P + +   W S++G   +H
Sbjct: 487 PNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH 534