BLASTX nr result

ID: Cimicifuga21_contig00032680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032680
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein lig...   147   9e-34
emb|CBI25234.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_002270721.1| PREDICTED: probable E3 ubiquitin-protein lig...   143   2e-32
emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]   143   2e-32
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   142   4e-32

>ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Vitis
           vinifera] gi|298204735|emb|CBI25233.3| unnamed protein
           product [Vitis vinifera]
          Length = 301

 Score =  147 bits (371), Expect = 9e-34
 Identities = 58/84 (69%), Positives = 68/84 (80%)
 Frame = -3

Query: 403 CAQCKVPWHSDISCERFQRLNKDERGREDIMLMTLAGKQKWRRCPSCKFYVEKKDGCLHI 224
           CA C VPWHS + CE +Q +N+DE+GRED+ML  LA ++KWRRCP CKFYVEK +GCLHI
Sbjct: 216 CAACYVPWHSGVGCEEYQMMNEDEKGREDLMLRELAQEKKWRRCPQCKFYVEKIEGCLHI 275

Query: 223 TCRCGFQFCYRCGATWTNTHGGCQ 152
           TCRC +QFCY CGA WT  HGGCQ
Sbjct: 276 TCRCTYQFCYACGAQWTQHHGGCQ 299


>emb|CBI25234.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  143 bits (360), Expect = 2e-32
 Identities = 55/84 (65%), Positives = 67/84 (79%)
 Frame = -3

Query: 403 CAQCKVPWHSDISCERFQRLNKDERGREDIMLMTLAGKQKWRRCPSCKFYVEKKDGCLHI 224
           C QC+VPWHS + C   QRLN DERGRED++L  LA ++KW+RCP CKFYVEK +GC+H+
Sbjct: 229 CVQCRVPWHSGMECREVQRLNADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHL 288

Query: 223 TCRCGFQFCYRCGATWTNTHGGCQ 152
           TCRCGF+FCYRCG  W+  HG CQ
Sbjct: 289 TCRCGFEFCYRCGGKWSVNHGTCQ 312


>ref|XP_002270721.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Vitis
           vinifera]
          Length = 378

 Score =  143 bits (360), Expect = 2e-32
 Identities = 55/84 (65%), Positives = 67/84 (79%)
 Frame = -3

Query: 403 CAQCKVPWHSDISCERFQRLNKDERGREDIMLMTLAGKQKWRRCPSCKFYVEKKDGCLHI 224
           C QC+VPWHS + C   QRLN DERGRED++L  LA ++KW+RCP CKFYVEK +GC+H+
Sbjct: 292 CVQCRVPWHSGMECREVQRLNADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHL 351

Query: 223 TCRCGFQFCYRCGATWTNTHGGCQ 152
           TCRCGF+FCYRCG  W+  HG CQ
Sbjct: 352 TCRCGFEFCYRCGGKWSVNHGTCQ 375


>emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]
          Length = 793

 Score =  143 bits (360), Expect = 2e-32
 Identities = 55/84 (65%), Positives = 67/84 (79%)
 Frame = -3

Query: 403 CAQCKVPWHSDISCERFQRLNKDERGREDIMLMTLAGKQKWRRCPSCKFYVEKKDGCLHI 224
           C QC+VPWHS + C   QRLN DERGRED++L  LA ++KW+RCP CKFYVEK +GC+H+
Sbjct: 707 CVQCRVPWHSGMECREVQRLNADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHL 766

Query: 223 TCRCGFQFCYRCGATWTNTHGGCQ 152
           TCRCGF+FCYRCG  W+  HG CQ
Sbjct: 767 TCRCGFEFCYRCGGKWSVNHGTCQ 790



 Score =  108 bits (269), Expect = 6e-22
 Identities = 43/63 (68%), Positives = 52/63 (82%)
 Frame = -3

Query: 403 CAQCKVPWHSDISCERFQRLNKDERGREDIMLMTLAGKQKWRRCPSCKFYVEKKDGCLHI 224
           CA C VPWHS + CE +Q +N+DE+GRED+ML  LA ++KWRRCP CKFYVEK +GCLHI
Sbjct: 180 CAXCYVPWHSGVGCEEYQMMNEDEKGREDLMLRELAQEKKWRRCPQCKFYVEKIEGCLHI 239

Query: 223 TCR 215
           TCR
Sbjct: 240 TCR 242


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
           gi|223547790|gb|EEF49282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 308

 Score =  142 bits (357), Expect = 4e-32
 Identities = 56/83 (67%), Positives = 65/83 (78%)
 Frame = -3

Query: 403 CAQCKVPWHSDISCERFQRLNKDERGREDIMLMTLAGKQKWRRCPSCKFYVEKKDGCLHI 224
           CAQC VPWHS I CE FQRLN+DERGRED+M++ LA ++KW RCP C+FYVE+  GC H+
Sbjct: 223 CAQCYVPWHSGIECEAFQRLNEDERGREDLMVIELAKEKKWSRCPKCRFYVERTQGCPHM 282

Query: 223 TCRCGFQFCYRCGATWTNTHGGC 155
            CRCGFQFCY C   WT  HGGC
Sbjct: 283 VCRCGFQFCYGCELEWTGNHGGC 305


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