BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032673
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]   124   8e-27
ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_002533114.1| pentatricopeptide repeat-containing protein,...    87   1e-15

>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/104 (61%), Positives = 81/104 (77%)
 Frame = -2

Query: 313 QQQLFSLLQCCKTTRELIQIHAQVIVNDFSQKNYILAKLLSLCIASGDIEHAHQAFEQIE 134
           QQ  FSLLQ C T ++L QIH Q+IVN FSQKN++L KLLS  I SG++ +AH+ FE+IE
Sbjct: 18  QQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIE 77

Query: 133 TPSTIVWNQMIRGFARSETPQKSIQLYNQMCRGESEPDGFTYSF 2
            PST VWNQMIRG ++SETP K ++LYN+M   E+EP+ FTYSF
Sbjct: 78  NPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSF 121


>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/94 (60%), Positives = 74/94 (78%)
 Frame = -2

Query: 283 CKTTRELIQIHAQVIVNDFSQKNYILAKLLSLCIASGDIEHAHQAFEQIETPSTIVWNQM 104
           C T ++L QIH Q+IVN FSQKN++L KLLS  I SG++ +AH+ FE+IE PST VWNQM
Sbjct: 44  CDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQM 103

Query: 103 IRGFARSETPQKSIQLYNQMCRGESEPDGFTYSF 2
           IRG ++SETP K ++LYN+M   E+EP+ FTYSF
Sbjct: 104 IRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSF 137


>ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/104 (52%), Positives = 74/104 (71%)
 Frame = -2

Query: 313 QQQLFSLLQCCKTTRELIQIHAQVIVNDFSQKNYILAKLLSLCIASGDIEHAHQAFEQIE 134
           QQ +FS+L+ C + R L +IHAQ++V+ FSQKNYIL  LLSL I+ G +  A + FE I 
Sbjct: 27  QQFIFSVLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDIT 86

Query: 133 TPSTIVWNQMIRGFARSETPQKSIQLYNQMCRGESEPDGFTYSF 2
            PST VWNQ+I+G  RS+T +KSI+L+ +M     E +GFTYSF
Sbjct: 87  APSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSF 130


>ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/104 (51%), Positives = 73/104 (70%)
 Frame = -2

Query: 313 QQQLFSLLQCCKTTRELIQIHAQVIVNDFSQKNYILAKLLSLCIASGDIEHAHQAFEQIE 134
           QQ +FS+L+ C + R L + HAQ++V+ FSQKNYIL  LLSL I+ G +  A + FE I 
Sbjct: 27  QQFIFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDIT 86

Query: 133 TPSTIVWNQMIRGFARSETPQKSIQLYNQMCRGESEPDGFTYSF 2
            PST VWNQ+I+G  RS+T +KSI+L+ +M     E +GFTYSF
Sbjct: 87  APSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSF 130


>ref|XP_002533114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527077|gb|EEF29259.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
 Frame = -2

Query: 313 QQQLFSLLQCCKTTRELIQIHAQVIVNDFSQKNYILAKLL--SLCIASGDIEHAHQAFEQ 140
           +QQ  SL Q C   R L QIHA +I+  F+  +Y L +L+  S  +  G I++AHQ F+Q
Sbjct: 13  RQQPSSLWQNCTNLRSLKQIHASLIIKGFNSSSYALRELIFASAIVIPGTIDYAHQLFDQ 72

Query: 139 IETPSTIVWNQMIRGFARSETPQKSIQLYNQMCRGESEPDGFTYSF 2
           +  P   +WN M+RG ++S +P K++ LY QM     +PD FT+SF
Sbjct: 73  VAEPDIFMWNTMMRGSSQSPSPIKAVSLYTQMENCGIKPDKFTFSF 118