BLASTX nr result

ID: Cimicifuga21_contig00032660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032660
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40216.3| unnamed protein product [Vitis vinifera]              116   3e-24
ref|XP_003590259.1| hypothetical protein MTR_1g050700 [Medicago ...    95   1e-17
ref|XP_002532782.1| conserved hypothetical protein [Ricinus comm...    93   4e-17
ref|XP_002315454.1| predicted protein [Populus trichocarpa] gi|2...    89   6e-16
ref|XP_004164144.1| PREDICTED: uncharacterized protein LOC101230...    89   1e-15

>emb|CBI40216.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  116 bits (291), Expect = 3e-24
 Identities = 65/139 (46%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
 Frame = +2

Query: 2   ENMEGFAAELVLPPISSIPKPLHTLFNNSQLTPSISTKFPNQNL----RTPRRFAIFAQG 169
           ENM GF   L  PPI        ++ ++   TP +S K    ++      PR+  + A+ 
Sbjct: 48  ENMLGFTTALFHPPIP------FSIRSDPPTTPILSFKATANSIYPYFHVPRKLVVKAEK 101

Query: 170 NNGISDNSNEKENGFNGQEDFKKDQRQILSFSWRDLLNPDPENIVAVGLTGLLTWASVQV 349
            NG  +   EK +   G ED KKD+  IL+  WRDLL+P+PENI+A+GL+G+LTWASVQV
Sbjct: 102 GNG-KEGEEEKRSKNGGGEDLKKDKGPILNVKWRDLLDPNPENILAIGLSGVLTWASVQV 160

Query: 350 LWQLFIISLAIVLAALKYS 406
           LWQLF ISL I++AALKYS
Sbjct: 161 LWQLFFISLTILVAALKYS 179


>ref|XP_003590259.1| hypothetical protein MTR_1g050700 [Medicago truncatula]
           gi|355479307|gb|AES60510.1| hypothetical protein
           MTR_1g050700 [Medicago truncatula]
          Length = 144

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 5/126 (3%)
 Frame = +2

Query: 44  ISSIPKPLHTLFNNSQLTPSISTKFPNQNLRTPRRFAIFAQGN---NGIS--DNSNEKEN 208
           I S    +H+L    Q   +IS  F   N R PR   + A  N   NG+   D ++++  
Sbjct: 10  IPSSSLSIHSLRYQPQHFSTISITF---NSRKPRPLPLSASNNSNSNGVKEEDKNSQQPP 66

Query: 209 GFNGQEDFKKDQRQILSFSWRDLLNPDPENIVAVGLTGLLTWASVQVLWQLFIISLAIVL 388
             +GQE+  +D+R +   +W  LL+ DP+N++A+GLTG+LTWASVQVLWQL  ISLAI++
Sbjct: 67  SSSGQEE--QDKRPLFGLNWSSLLDRDPDNVLALGLTGILTWASVQVLWQLLFISLAILV 124

Query: 389 AALKYS 406
           AALKYS
Sbjct: 125 AALKYS 130


>ref|XP_002532782.1| conserved hypothetical protein [Ricinus communis]
           gi|223527470|gb|EEF29601.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 153

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 58/140 (41%), Positives = 81/140 (57%), Gaps = 14/140 (10%)
 Frame = +2

Query: 29  LVLPPISSIPKPLHTLFNNSQLTPSISTKFPNQNLRTPRRFAIFAQGN---NGISDNSNE 199
           L+  PISSI +P+   F+ +        KF     +T   F +FAQ N   N I + SN+
Sbjct: 7   LIRSPISSISRPI---FHFTSFPLKTQLKFS----KTQSGFILFAQNNSNNNQIQEPSNQ 59

Query: 200 KENGFNGQ----------EDFKKDQRQILSFSWRDLL-NPDPENIVAVGLTGLLTWASVQ 346
           ++   NG           +D +  +  + +    DLL +PDP+NI+AVGLTGLL WAS Q
Sbjct: 60  EQQQNNGSPKNSGDADNDDDLRGSRNSLFNIKLGDLLLDPDPDNILAVGLTGLLAWASAQ 119

Query: 347 VLWQLFIISLAIVLAALKYS 406
           VLWQLF++S AI++AALKYS
Sbjct: 120 VLWQLFVVSFAILVAALKYS 139


>ref|XP_002315454.1| predicted protein [Populus trichocarpa] gi|222864494|gb|EEF01625.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 51/96 (53%), Positives = 66/96 (68%), Gaps = 12/96 (12%)
 Frame = +2

Query: 155 IFAQGNNGIS------DNSNEKENGFN----GQEDFKKDQRQ-ILSFSWRDLL-NPDPEN 298
           +FA+ NN         +   EK+NG +    G  D K+DQ   +    W DLL NPDP+N
Sbjct: 45  VFARTNNNNDPAQEPKEPEQEKKNGSSNNSGGGYDLKQDQPPPLFDIKWGDLLLNPDPDN 104

Query: 299 IVAVGLTGLLTWASVQVLWQLFIISLAIVLAALKYS 406
           I+AVGLTGLL+WASVQVLWQLF+I+LAI++AA+KYS
Sbjct: 105 ILAVGLTGLLSWASVQVLWQLFVIALAILVAAVKYS 140


>ref|XP_004164144.1| PREDICTED: uncharacterized protein LOC101230950 [Cucumis sativus]
          Length = 259

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
 Frame = +2

Query: 194 NEKENGFNGQEDFKKDQRQILSFSWRDLL-NPDPENIVAVGLTGLLTWASVQVLWQLFII 370
           N      NG +D KK++  + +  W +LL +PDP+NI+AV LTGLL WASVQVLWQLF I
Sbjct: 174 NGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFI 233

Query: 371 SLAIVLAALKYS 406
           SLAI++AALKYS
Sbjct: 234 SLAILVAALKYS 245


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