BLASTX nr result

ID: Cimicifuga21_contig00032647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032647
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC04718.1| MYB-like DNA-binding domain protein [Gossypium hi...   170   1e-40
gb|ACV81697.1| MYBF1 [Vitis vinifera]                                 159   2e-37
gb|ACT88298.1| R2R3 MYB transcription factor [Vitis vinifera]         159   2e-37
ref|XP_002269995.1| PREDICTED: transcription factor MYB12 [Vitis...   159   2e-37
dbj|BAM71801.1| R2R3-MYB transcription factor [Gentiana triflora]     151   6e-35

>gb|AAC04718.1| MYB-like DNA-binding domain protein [Gossypium hirsutum]
          Length = 453

 Score =  170 bits (431), Expect = 1e-40
 Identities = 93/162 (57%), Positives = 113/162 (69%), Gaps = 13/162 (8%)
 Frame = -2

Query: 457 KSCRLRWINYLRADLKRGNITTQEEEIIIKMHNTLGNRWSLIAGHLPGRTDNEIKNYWNS 278
           KSCRLRWINYLRADLKRGN T+QEEE+II +H TLGNRWSLIA +LPGRTDNEIKNYWNS
Sbjct: 51  KSCRLRWINYLRADLKRGNFTSQEEEVIINLHATLGNRWSLIASYLPGRTDNEIKNYWNS 110

Query: 277 HLSRRIHTFRRPIGEAPPTIVMDLVKMNGVCKKK-GRTSRAAMKKNKIPSSH-------- 125
           HLSR+IH+FRRP+ ++ P ++MDL K   + K+K GRTS  +MK+NK  S+         
Sbjct: 111 HLSRKIHSFRRPLTQSMP-VIMDLTKTAVIAKRKGGRTSEGSMKENKSCSTQKDTGSCSN 169

Query: 124 ---VKVSTNNREGFLGLPSMP-LQEEPLNSDAERKNMELDPH 11
                V  N  E F   PS P L++E L++ A    M LD H
Sbjct: 170 KPTENVCVNEVEPF---PSTPLLEKETLSTTAIEDRMVLDQH 208


>gb|ACV81697.1| MYBF1 [Vitis vinifera]
          Length = 367

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/111 (70%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
 Frame = -2

Query: 457 KSCRLRWINYLRADLKRGNITTQEEEIIIKMHNTLGNRWSLIAGHLPGRTDNEIKNYWNS 278
           KSCRLRWINYLRADLKRGN + +EEEIIIK+H +LGNRWS+IAG LPGRTDNEIKNYWNS
Sbjct: 51  KSCRLRWINYLRADLKRGNFSEEEEEIIIKLHASLGNRWSMIAGQLPGRTDNEIKNYWNS 110

Query: 277 HLSRRIHTFRRPIGEAPPTIVMDLVKMNGVCKKK-GRTSRAAMKKNKIPSS 128
           HLSR++H+FRR   E  P++V+DL K+    K+K GRTSR AMKKN+   S
Sbjct: 111 HLSRKVHSFRRLTNEG-PSMVIDLAKVTTAHKRKVGRTSRWAMKKNRSDKS 160


>gb|ACT88298.1| R2R3 MYB transcription factor [Vitis vinifera]
          Length = 367

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/111 (70%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
 Frame = -2

Query: 457 KSCRLRWINYLRADLKRGNITTQEEEIIIKMHNTLGNRWSLIAGHLPGRTDNEIKNYWNS 278
           KSCRLRWINYLRADLKRGN + +EEEIIIK+H +LGNRWS+IAG LPGRTDNEIKNYWNS
Sbjct: 51  KSCRLRWINYLRADLKRGNFSEEEEEIIIKLHASLGNRWSMIAGQLPGRTDNEIKNYWNS 110

Query: 277 HLSRRIHTFRRPIGEAPPTIVMDLVKMNGVCKKK-GRTSRAAMKKNKIPSS 128
           HLSR++H+FRR   E  P++V+DL K+    K+K GRTSR AMKKN+   S
Sbjct: 111 HLSRKVHSFRRLTNEG-PSMVIDLAKVTTAHKRKVGRTSRWAMKKNRSDKS 160


>ref|XP_002269995.1| PREDICTED: transcription factor MYB12 [Vitis vinifera]
           gi|297743957|emb|CBI36927.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/111 (70%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
 Frame = -2

Query: 457 KSCRLRWINYLRADLKRGNITTQEEEIIIKMHNTLGNRWSLIAGHLPGRTDNEIKNYWNS 278
           KSCRLRWINYLRADLKRGN + +EEEIIIK+H +LGNRWS+IAG LPGRTDNEIKNYWNS
Sbjct: 51  KSCRLRWINYLRADLKRGNFSEEEEEIIIKLHASLGNRWSMIAGQLPGRTDNEIKNYWNS 110

Query: 277 HLSRRIHTFRRPIGEAPPTIVMDLVKMNGVCKKK-GRTSRAAMKKNKIPSS 128
           HLSR++H+FRR   E  P++V+DL K+    K+K GRTSR AMKKN+   S
Sbjct: 111 HLSRKVHSFRRLTNEG-PSMVIDLAKVTTAHKRKVGRTSRWAMKKNRSDKS 160


>dbj|BAM71801.1| R2R3-MYB transcription factor [Gentiana triflora]
          Length = 329

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/110 (67%), Positives = 88/110 (80%), Gaps = 5/110 (4%)
 Frame = -2

Query: 457 KSCRLRWINYLRADLKRGNITTQEEEIIIKMHNTLGNRWSLIAGHLPGRTDNEIKNYWNS 278
           KSCRLRWINYLR+DLKRGNI+ QEEEIII++H  LGNRWS+IAG+LPGRTDNEIKNYWNS
Sbjct: 51  KSCRLRWINYLRSDLKRGNISEQEEEIIIRLHANLGNRWSVIAGNLPGRTDNEIKNYWNS 110

Query: 277 HLSRRIHTFRRPIG----EAPPTIVMDLVKMNGVCKKKG-RTSRAAMKKN 143
           HLSR+IHTFRRP+G    +    I+ D+ +   + K +G R  RA MKKN
Sbjct: 111 HLSRKIHTFRRPVGGRTADTAHAIMADVARKLAMKKLRGVRIRRAEMKKN 160


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