BLASTX nr result

ID: Cimicifuga21_contig00032617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032617
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604393.1| hypothetical protein MTR_4g010330 [Medicago ...    59   5e-07
ref|NP_001235781.1| uncharacterized protein LOC100499770 [Glycin...    57   2e-06
gb|AFW66150.1| hypothetical protein ZEAMMB73_306186 [Zea mays]         56   3e-06
ref|NP_001142741.1| uncharacterized protein LOC100275083 [Zea ma...    56   3e-06
ref|XP_003604392.1| hypothetical protein MTR_4g010330 [Medicago ...    55   4e-06

>ref|XP_003604393.1| hypothetical protein MTR_4g010330 [Medicago truncatula]
           gi|355505448|gb|AES86590.1| hypothetical protein
           MTR_4g010330 [Medicago truncatula]
          Length = 288

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/59 (45%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
 Frame = -1

Query: 313 GLLLWNQTRQQWLGNKRRQSKTQKVQEPKLR----CGGQYFLLLWLCNVSVRAPNLRSS 149
           GL+LWNQTRQ+W+GNK+ +++TQ+++EPKLR    C  ++F   WLC+ +    +L +S
Sbjct: 205 GLILWNQTRQRWVGNKKPENRTQQLREPKLRTYFQCLAKFF---WLCSWNATYESLLTS 260


>ref|NP_001235781.1| uncharacterized protein LOC100499770 [Glycine max]
           gi|255626433|gb|ACU13561.1| unknown [Glycine max]
          Length = 174

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
 Frame = -1

Query: 313 GLLLWNQTRQQWLGNKRRQSKTQKVQEPKLRCGGQYFLLL----WLCNVSVRAPNLRSS 149
           G++LWNQTRQ+W+GNK+ +++TQ++QEPKLR    Y L L    WLC+ +    +L  S
Sbjct: 91  GVILWNQTRQRWVGNKKPENQTQQLQEPKLR---TYCLCLAKNFWLCSWNATYESLLGS 146


>gb|AFW66150.1| hypothetical protein ZEAMMB73_306186 [Zea mays]
          Length = 109

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = -1

Query: 313 GLLLWNQTRQQWLGNKRRQSKTQKVQEPKLRCGGQYFLLL 194
           GLLLW+QTRQQW+GN+R  S+ Q+ QEPK+ C   Y  LL
Sbjct: 40  GLLLWHQTRQQWIGNRRLNSQGQQSQEPKISCNATYESLL 79


>ref|NP_001142741.1| uncharacterized protein LOC100275083 [Zea mays]
           gi|195608996|gb|ACG26328.1| hypothetical protein [Zea
           mays] gi|224031543|gb|ACN34847.1| unknown [Zea mays]
           gi|413926219|gb|AFW66151.1| hypothetical protein
           ZEAMMB73_306186 [Zea mays]
          Length = 173

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = -1

Query: 313 GLLLWNQTRQQWLGNKRRQSKTQKVQEPKLRCGGQYFLLL 194
           GLLLW+QTRQQW+GN+R  S+ Q+ QEPK+ C   Y  LL
Sbjct: 104 GLLLWHQTRQQWIGNRRLNSQGQQSQEPKISCNATYESLL 143


>ref|XP_003604392.1| hypothetical protein MTR_4g010330 [Medicago truncatula]
           gi|355505447|gb|AES86589.1| hypothetical protein
           MTR_4g010330 [Medicago truncatula]
           gi|388496552|gb|AFK36342.1| unknown [Medicago
           truncatula]
          Length = 156

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/63 (42%), Positives = 40/63 (63%)
 Frame = -1

Query: 313 GLLLWNQTRQQWLGNKRRQSKTQKVQEPKLRCGGQYFLLLWLCNVSVRAPNLRSSTISSL 134
           GL+LWNQTRQ+W+GNK+ +++TQ+++EPKL     Y  LL   N   R P   +  +  L
Sbjct: 87  GLILWNQTRQRWVGNKKPENRTQQLREPKLSWNATYESLL-TSNKPFRQPIPLAEMVDFL 145

Query: 133 FDV 125
            D+
Sbjct: 146 VDI 148


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