BLASTX nr result
ID: Cimicifuga21_contig00032615
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00032615
(736 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containi... 240 2e-61
ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|2... 231 2e-58
ref|XP_002526491.1| pentatricopeptide repeat-containing protein,... 219 4e-55
ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [... 217 2e-54
ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containi... 216 4e-54
>ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 240 bits (613), Expect = 2e-61
Identities = 114/222 (51%), Positives = 161/222 (72%)
Frame = +3
Query: 69 RYLSQDVLSYVVLKIGPSRSRHELLNFIWCDHLLYSRPSSTFTLLDSLMRAFLKVDMIPH 248
R+++QDV+ +V+ +IG RS +L+ F+W H +Y S F++LDSLMRAF+ +M
Sbjct: 159 RHVAQDVIWWVIARIGVLRSG-DLVEFMWRGHHVYE---SDFSVLDSLMRAFVNAEMGFQ 214
Query: 249 VLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLL 428
L +LG+MRE ++PS S + R G + VWKLFKD+I +GP P YTF+ ++L
Sbjct: 215 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 274
Query: 429 GFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCP 608
GFC +G + LGE+LLH+MPKFHC P+ + YNI+INA CI GR+ +ALAW + MI+RGC P
Sbjct: 275 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 334
Query: 609 TAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
T VTF+T+INA CK+GN++EA K FDG++E+G +PN I+YNT
Sbjct: 335 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNT 376
Score = 83.2 bits (204), Expect = 5e-14
Identities = 49/174 (28%), Positives = 79/174 (45%)
Frame = +3
Query: 210 LMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKG 389
L+ F K + + G+M + P + A + ++G + +F +M+ KG
Sbjct: 552 LLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG 611
Query: 390 PYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEAL 569
P N+ +N ++ GFC G L L VM PD++T N+II C GR A+
Sbjct: 612 LIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAI 671
Query: 570 AWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYN 731
M Q G P +T++T+IN CK +M+ A + + G P+ YN
Sbjct: 672 NVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN 725
Score = 73.2 bits (178), Expect = 5e-11
Identities = 45/159 (28%), Positives = 74/159 (46%)
Frame = +3
Query: 258 VLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGFC 437
++G+M E+ L + A +RG L+ +M +G +P F+ + G
Sbjct: 533 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 592
Query: 438 TRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTAV 617
+G ++ + M + P+ + YN +I +C G+ EAL M RG P
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 652
Query: 618 TFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
T + II LCKQG M A+ F + + G++P+ I YNT
Sbjct: 653 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691
Score = 72.4 bits (176), Expect = 9e-11
Identities = 45/176 (25%), Positives = 81/176 (46%)
Frame = +3
Query: 204 DSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIA 383
+SL+ F K + L + MR L P + N ++G + +F DM
Sbjct: 620 NSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQ 679
Query: 384 KGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFE 563
G P T+N ++ G+C ++ + L++ M PD+ TYNI I+ +C S R
Sbjct: 680 TGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNR 739
Query: 564 ALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYN 731
A+ +D ++ G P VT+++++N +C + AM + ++ PN + N
Sbjct: 740 AVLMLDELVSAGIVPNTVTYNSMLNGVCSD-ILDRAMILTARLLKMAFVPNVVTAN 794
Score = 72.0 bits (175), Expect = 1e-10
Identities = 47/169 (27%), Positives = 74/169 (43%)
Frame = +3
Query: 228 KVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNY 407
K ++ V +M + L P+ A N + G KL K M +G P +
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 652
Query: 408 TFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFM 587
T N+++ G C +G ++ + M + PD+ TYN +IN YC + A V+ M
Sbjct: 653 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 712
Query: 588 IQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
G P T++ I+ C M A+ D + GI PNT+ YN+
Sbjct: 713 YASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNS 761
Score = 58.9 bits (141), Expect = 1e-06
Identities = 40/177 (22%), Positives = 76/177 (42%)
Frame = +3
Query: 198 LLDSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDM 377
+ ++LM ++K+ I ++ +MR++ + P N + G +L KD+
Sbjct: 373 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 432
Query: 378 IAKGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRS 557
G P F++ + G C G L L M + P + +N +I AY +G
Sbjct: 433 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492
Query: 558 FEALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIY 728
+A M+ G P+ T S+++ L G + EA + + E G++ N + +
Sbjct: 493 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAF 549
Score = 58.9 bits (141), Expect = 1e-06
Identities = 42/155 (27%), Positives = 69/155 (44%)
Frame = +3
Query: 270 MREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGFCTRGN 449
M E+ L PS+ A N + G ++ +K M+ G P+ T + +L+G G
Sbjct: 467 MLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGR 526
Query: 450 LQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTAVTFST 629
LQ L+ M + + + ++++ + G A + M +RG P V FS
Sbjct: 527 LQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSA 586
Query: 630 IINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
I+ L KQG + EA F + G+ PN YN+
Sbjct: 587 FIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNS 621
Score = 57.0 bits (136), Expect = 4e-06
Identities = 37/158 (23%), Positives = 67/158 (42%)
Frame = +3
Query: 258 VLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGFC 437
+L M + +P+ A N RG F MI +G PT TFN ++ FC
Sbjct: 288 LLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFC 347
Query: 438 TRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTAV 617
GN+ L + + P+ YN ++N Y +A + M ++G P +
Sbjct: 348 KEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGI 407
Query: 618 TFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYN 731
TF+ +++ K G + + I +G+ P+ +++
Sbjct: 408 TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFD 445
Score = 55.8 bits (133), Expect = 9e-06
Identities = 37/155 (23%), Positives = 64/155 (41%)
Frame = +3
Query: 270 MREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGFCTRGN 449
M E P++ N + G KLF + G P +N ++ G+
Sbjct: 327 MIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMRE 386
Query: 450 LQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTAVTFST 629
+ L M K PD T+NI+++ + GR + + + G P F
Sbjct: 387 IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDI 446
Query: 630 IINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
++ LC G + EAM+F + E G++P+ I +N+
Sbjct: 447 SVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNS 481
Score = 55.8 bits (133), Expect = 9e-06
Identities = 40/149 (26%), Positives = 64/149 (42%)
Frame = +3
Query: 285 LKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGFCTRGNLQLGE 464
L PS S + G +L MI KG N F V+L F RG++ +
Sbjct: 507 LTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQ 566
Query: 465 TLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTAVTFSTIINAL 644
+L M + +PDV ++ I+ G EA M+++G P ++++I
Sbjct: 567 SLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGF 626
Query: 645 CKQGNMLEAMKFFDGIREVGIAPNTIIYN 731
CK G + EA+K +R G+ P+ N
Sbjct: 627 CKCGKLNEALKLEKVMRHRGLLPDIFTTN 655
>ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|222835157|gb|EEE73592.1|
predicted protein [Populus trichocarpa]
Length = 726
Score = 231 bits (588), Expect = 2e-58
Identities = 111/222 (50%), Positives = 154/222 (69%)
Frame = +3
Query: 69 RYLSQDVLSYVVLKIGPSRSRHELLNFIWCDHLLYSRPSSTFTLLDSLMRAFLKVDMIPH 248
++L+QDV+S+V+ ++G RSR E++ F+W H + S F++LD+LMR FLKV+M
Sbjct: 42 KFLAQDVVSWVIRRVGVDRSR-EVVEFMWKRHAEFE---SDFSVLDTLMRGFLKVEMGCE 97
Query: 249 VLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLL 428
L ++G+MRE L+PS SA+ R G +VWKL + MI +GP P N FN ++L
Sbjct: 98 ALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVIL 157
Query: 429 GFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCP 608
GFC +G++++GE+LL VM KF C PDVY YNI+INAYC G++F+AL W+ FMI GC P
Sbjct: 158 GFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTP 217
Query: 609 TAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
+ VTF T+INA C QGNM+EA FDG++E G PN + YNT
Sbjct: 218 SLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNT 259
Score = 73.6 bits (179), Expect = 4e-11
Identities = 49/176 (27%), Positives = 77/176 (43%)
Frame = +3
Query: 207 SLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAK 386
SL+ K+ + +L +M E L + +A R G + L+ +M +
Sbjct: 399 SLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGR 458
Query: 387 GPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEA 566
G +P F+ + G G + + M K P+ + YN +I +C SGR EA
Sbjct: 459 GIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEA 518
Query: 567 LAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
L M ++G P T + IIN LCK+G M A F + G+ P+ + YNT
Sbjct: 519 LMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNT 574
Score = 72.4 bits (176), Expect = 9e-11
Identities = 48/182 (26%), Positives = 77/182 (42%)
Frame = +3
Query: 186 STFTLLDSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKL 365
+ FTLL + + ++ + + +M + P A + G + +
Sbjct: 430 AAFTLL---LDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDV 486
Query: 366 FKDMIAKGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCI 545
F M KG P N+ +N ++ GFC G LQ L M + PD++T NIIIN C
Sbjct: 487 FLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCK 546
Query: 546 SGRSFEALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTII 725
GR A M G P VT++T+I+ CK + + + + + G P+
Sbjct: 547 EGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITT 606
Query: 726 YN 731
YN
Sbjct: 607 YN 608
Score = 68.6 bits (166), Expect = 1e-09
Identities = 40/168 (23%), Positives = 71/168 (42%)
Frame = +3
Query: 231 VDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYT 410
V ++ V +M ++ P+ N G L ++M KG P +T
Sbjct: 477 VGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFT 536
Query: 411 FNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMI 590
N+++ G C G ++ + M PD+ TYN +I+ YC + + V+ M
Sbjct: 537 TNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMY 596
Query: 591 QRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
G P T++ ++ LC M A+ + + G+ P+T+ YNT
Sbjct: 597 ATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNT 644
Score = 66.6 bits (161), Expect = 5e-09
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Frame = +3
Query: 204 DSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIA 383
+SL+R F + L++ +M + L P + N + G + +F++M
Sbjct: 503 NSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHH 562
Query: 384 KGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFE 563
G P T+N ++ G+C + + +++ M PD+ TYNI ++ C +
Sbjct: 563 TGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSR 622
Query: 564 ALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLE-AMKFFDGIREVGIAPNTIIYN 731
A+ ++ +I G P VT++T++N +C ++LE AM + ++ PN + N
Sbjct: 623 AVMMLEELISAGVVPDTVTYNTVMNGVCT--DVLERAMIVTAKLLKMAFVPNVVTAN 677
>ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534166|gb|EEF35882.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 884
Score = 219 bits (559), Expect = 4e-55
Identities = 108/220 (49%), Positives = 154/220 (70%)
Frame = +3
Query: 75 LSQDVLSYVVLKIGPSRSRHELLNFIWCDHLLYSRPSSTFTLLDSLMRAFLKVDMIPHVL 254
L+QDV+S+V+ +IG SRS H L+ F+W +H Y S F++L++LMR F+ +M L
Sbjct: 173 LAQDVISWVIRRIGASRSAH-LVEFMWANHHKYE---SDFSILNTLMRGFMNSEMAYESL 228
Query: 255 LVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGF 434
+L +MRE ++PS SA++ R G + +VWKL + MI GP P N+ FN+M+L F
Sbjct: 229 EILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCF 288
Query: 435 CTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTA 614
C +G L++ E+LL VMPKF C PDVY YNI+INAY I GR+ +AL ++ MI+ GC P+
Sbjct: 289 CQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSL 348
Query: 615 VTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
+TFSTII A C +GN++EA K F+GI+EVG++PN +YNT
Sbjct: 349 ITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNT 388
Score = 75.5 bits (184), Expect = 1e-11
Identities = 45/155 (29%), Positives = 69/155 (44%)
Frame = +3
Query: 267 KMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGFCTRG 446
+M + P A + + G ++ F +M KG P N+ +N ++ G C G
Sbjct: 583 EMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCG 642
Query: 447 NLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTAVTFS 626
L L M + PD++T NIIIN +C GR A M G P VT++
Sbjct: 643 KLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYN 702
Query: 627 TIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYN 731
T+I CK +M+ A +F + + G P+ YN
Sbjct: 703 TLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYN 737
Score = 71.6 bits (174), Expect = 2e-10
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Frame = +3
Query: 204 DSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIA 383
+SL+ + L + +MR++ L P + N + G + + F +M
Sbjct: 632 NSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHH 691
Query: 384 KGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFE 563
G P T+N ++ G+C ++ + L+ M PD+ TYNI I +C S +
Sbjct: 692 IGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISR 751
Query: 564 ALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLE-AMKFFDGIREVGIAPNTIIYN 731
A+ +D +I G P VT++T++NA+C +ML+ AM + ++ PN + N
Sbjct: 752 AVTMLDELIAVGVVPNTVTYNTMMNAVCT--DMLDRAMVLTAKLLKMAFVPNVVTTN 806
Score = 69.7 bits (169), Expect = 6e-10
Identities = 50/185 (27%), Positives = 79/185 (42%)
Frame = +3
Query: 180 PSSTFTLLDSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVW 359
PSS+ S++ K + +L KM ++ L + A + G
Sbjct: 521 PSSS--TCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAH 578
Query: 360 KLFKDMIAKGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAY 539
L+ +M A+G P F+ + G G ++ M K P+ + YN +I+
Sbjct: 579 SLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGL 638
Query: 540 CISGRSFEALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNT 719
C G+ EAL M Q+G P T + IIN CK+G M A F + +G+ P+T
Sbjct: 639 CNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDT 698
Query: 720 IIYNT 734
+ YNT
Sbjct: 699 VTYNT 703
Score = 56.6 bits (135), Expect = 5e-06
Identities = 40/182 (21%), Positives = 76/182 (41%)
Frame = +3
Query: 183 SSTFTLLDSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWK 362
S + ++LM + K + ++ +MR++ + P + N + G ++
Sbjct: 380 SPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYE 439
Query: 363 LFKDMIAKGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYC 542
LF+D P ++V + G C G L L M + P V +N +I AY
Sbjct: 440 LFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYS 499
Query: 543 ISGRSFEALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTI 722
+G A M+ G P++ T S+++ L K+G + EA + + G+ N +
Sbjct: 500 RAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKV 559
Query: 723 IY 728
+
Sbjct: 560 AF 561
>ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 217 bits (552), Expect = 2e-54
Identities = 104/220 (47%), Positives = 157/220 (71%)
Frame = +3
Query: 75 LSQDVLSYVVLKIGPSRSRHELLNFIWCDHLLYSRPSSTFTLLDSLMRAFLKVDMIPHVL 254
L+QDV+S+++ ++G R+ +++++F+W +H +Y S F++L++L+R FL V M L
Sbjct: 142 LAQDVVSWLIARVGTGRT-NKIVDFMWRNHAMYE---SDFSVLNTLLRGFLNVGMGFEAL 197
Query: 255 LVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGF 434
VL MR ++P LS++ R G + +VWKLFKDMI KGP P+N TFN M+ GF
Sbjct: 198 EVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGF 257
Query: 435 CTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTA 614
C + + +GE+LLH+MPKF C PDV T+NI+INA CI GR++ A+ W+ M++ G P+
Sbjct: 258 CRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSV 317
Query: 615 VTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
TF+TI++ALC++GN++EA K FDGI+++GIAPN IYNT
Sbjct: 318 ATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNT 357
Score = 79.7 bits (195), Expect = 6e-13
Identities = 41/125 (32%), Positives = 65/125 (52%)
Frame = +3
Query: 360 KLFKDMIAKGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAY 539
KL K+M KG +TFN+++ GFC RG ++ M + PD++T+NI+I Y
Sbjct: 618 KLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGY 677
Query: 540 CISGRSFEALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNT 719
C + A V+ M G P T++T ++ C+ M +A+ D + GI P+T
Sbjct: 678 CKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDT 737
Query: 720 IIYNT 734
+ YNT
Sbjct: 738 VTYNT 742
Score = 70.9 bits (172), Expect = 3e-10
Identities = 45/176 (25%), Positives = 81/176 (46%)
Frame = +3
Query: 204 DSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIA 383
+SL+R + L + +MR++ L N RRG + F DM
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660
Query: 384 KGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFE 563
G P +TFN+++ G+C ++ +++ M PD+ TYN ++ YC + +
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720
Query: 564 ALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYN 731
A+ +D +I G P VT++T+++ +C + AM + ++G PN I N
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTN 775
Score = 69.7 bits (169), Expect = 6e-10
Identities = 43/175 (24%), Positives = 79/175 (45%)
Frame = +3
Query: 210 LMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKG 389
L+ + K++ + + +M+E + P A + G +++F +M A G
Sbjct: 533 LLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIG 592
Query: 390 PYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEAL 569
P N+ +N ++ G C G + L M + D +T+NIII+ +C G+ A+
Sbjct: 593 FVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAI 652
Query: 570 AWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
M + G P TF+ +I CK +M+ A + + + G+ P+ YNT
Sbjct: 653 ETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNT 707
Score = 56.2 bits (134), Expect = 7e-06
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +3
Query: 291 PSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTN-YTFNVMLLGFCTRGNLQLGET 467
PS S N R+G+ L M+ KG +P N + V+L G+ NL+ +
Sbjct: 490 PSSSTCNSLLMGLCRKGWLQEARILLYRMLEKG-FPINKVAYTVLLDGYFKMNNLEGAQF 548
Query: 468 LLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCPTAVTFSTIINALC 647
L M + YPD + +I+ +G EA M G P ++++I LC
Sbjct: 549 LWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLC 608
Query: 648 KQGNMLEAMKFFDGIREVGIAPNTIIYN 731
G + EA+K +R+ G+ +T +N
Sbjct: 609 DCGRVTEALKLEKEMRQKGLLSDTFTFN 636
>ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 216 bits (550), Expect = 4e-54
Identities = 107/221 (48%), Positives = 154/221 (69%)
Frame = +3
Query: 69 RYLSQDVLSYVVLKIGPSRSRHELLNFIWCDHLLYSRPSSTFTLLDSLMRAFLKVDMIPH 248
R+L+QD++S+VV +IGP RS++ L F+W H +Y S +++LD+LMRAF+K +M
Sbjct: 181 RFLAQDIVSWVVARIGPGRSKN-LAAFMWEGHRVYE---SDYSVLDTLMRAFVKSEMHFE 236
Query: 249 VLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLL 428
L +L KMRE + P+ SA++ R G VWKLF D++ KGP P N+TFN+++L
Sbjct: 237 ALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLIL 296
Query: 429 GFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQRGCCP 608
FC +G ++GE LLHVM KF C PDVY+YNI+INA C+ G+S AL ++ MI+ GC P
Sbjct: 297 EFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKP 356
Query: 609 TAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYN 731
+ TF TII+A CK+GN+ A K+FD I ++G++ NTI+YN
Sbjct: 357 SIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYN 397
Score = 77.8 bits (190), Expect = 2e-12
Identities = 48/176 (27%), Positives = 78/176 (44%)
Frame = +3
Query: 204 DSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIA 383
+S++ A+ + G M + L PS S + R+G W DMI
Sbjct: 502 NSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMID 561
Query: 384 KGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFE 563
KG TN F V+L G+ G + + E+L + M +PD + IN CISG +
Sbjct: 562 KGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTD 621
Query: 564 ALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYN 731
A M+++G P ++++I CK G + EA+K + + G+ P+ N
Sbjct: 622 AYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVN 677
Score = 76.3 bits (186), Expect = 6e-12
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Frame = +3
Query: 204 DSLMRAFLKVDMIPHVLLVLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIA 383
+SL+ F KV + L ++ +M + L P + +N ++G + F DM
Sbjct: 642 NSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCR 701
Query: 384 KGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFE 563
G P T+N ++ G+C ++ + L+ M PD+ TYNI I+ YC +
Sbjct: 702 MGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINR 761
Query: 564 ALAWVDFMIQRGCCPTAVTFSTIINALCKQGNML--EAMKFFDGIREVGIAPNTIIYN 731
A+ ++ +I G P VT++T+INA+C N++ AM + ++ PNT+ N
Sbjct: 762 AVMILEELISVGIVPNTVTYNTMINAVC---NVILDHAMILTAKLLKMAFVPNTVTVN 816
Score = 71.6 bits (174), Expect = 2e-10
Identities = 41/131 (31%), Positives = 63/131 (48%)
Frame = +3
Query: 339 GYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGFCTRGNLQLGETLLHVMPKFHCYPDVYTY 518
G + +F DM+ KG P N+ +N ++ GFC G L L+ M K PD++T
Sbjct: 617 GLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTV 676
Query: 519 NIIINAYCISGRSFEALAWVDFMIQRGCCPTAVTFSTIINALCKQGNMLEAMKFFDGIRE 698
N+II C GR A+ M + G P VT++T+I+ CK ++ A + +
Sbjct: 677 NMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSD 736
Query: 699 VGIAPNTIIYN 731
G P+ YN
Sbjct: 737 SGWEPDLTTYN 747
Score = 68.6 bits (166), Expect = 1e-09
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Frame = +3
Query: 258 VLGKMREERLKPSLSAMNXXXXXXXRRGYFPTVWKLFKDMIAKGPYPTNYTFNVMLLGFC 437
V M + P+ N + G KL ++M +G P +T N+++ G C
Sbjct: 625 VFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLC 684
Query: 438 TRGNLQLGETLLHVMPKFHCYPDVYTYNIIINAYCISGRSFEALAWVDFMIQ---RGCCP 608
+G ++L M + PD+ TYN +I+ YC ++F+ D M++ G P
Sbjct: 685 KQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYC---KAFDVGGADDLMMKMSDSGWEP 741
Query: 609 TAVTFSTIINALCKQGNMLEAMKFFDGIREVGIAPNTIIYNT 734
T++ I+ C + A+ + + VGI PNT+ YNT
Sbjct: 742 DLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNT 783