BLASTX nr result
ID: Cimicifuga21_contig00032611
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032611 (243 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-27 ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ... 125 4e-27 ref|XP_002307751.1| predicted protein [Populus trichocarpa] gi|2... 124 8e-27 ref|XP_002523825.1| pentatricopeptide repeat-containing protein,... 123 1e-26 ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi... 122 3e-26 >ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial-like [Glycine max] Length = 564 Score = 125 bits (314), Expect = 4e-27 Identities = 56/80 (70%), Positives = 69/80 (86%) Frame = +2 Query: 2 VKKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSA 181 VKK +PNA TFN IF CI K+ DVN AHRMY +MKELNC+PNT+TYN+LMRMFA+S+S Sbjct: 414 VKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRST 473 Query: 182 DMVFKLKQEMDENEVEPNVD 241 DMV K+K+EMDE++VEPNV+ Sbjct: 474 DMVLKMKKEMDESQVEPNVN 493 >ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 530 Score = 125 bits (314), Expect = 4e-27 Identities = 59/80 (73%), Positives = 67/80 (83%) Frame = +2 Query: 2 VKKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSA 181 VKK +PNA TFN IF CI ++ DVN AHRMY KMKEL C PNT+TYN+LMRMFADSKS Sbjct: 379 VKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSI 438 Query: 182 DMVFKLKQEMDENEVEPNVD 241 DMV KLK+EMDE+EVEPNV+ Sbjct: 439 DMVLKLKKEMDESEVEPNVN 458 >ref|XP_002307751.1| predicted protein [Populus trichocarpa] gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa] Length = 480 Score = 124 bits (311), Expect = 8e-27 Identities = 58/79 (73%), Positives = 65/79 (82%) Frame = +2 Query: 5 KKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSAD 184 KK C+PNA TFN +F CI K+ DVNAAHRMY KMKELNCE NTVTYN LM+MF SKS D Sbjct: 331 KKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTD 390 Query: 185 MVFKLKQEMDENEVEPNVD 241 MV KLK EMDEN++EPNV+ Sbjct: 391 MVLKLKTEMDENKIEPNVN 409 >ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 528 Score = 123 bits (309), Expect = 1e-26 Identities = 57/80 (71%), Positives = 67/80 (83%) Frame = +2 Query: 2 VKKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSA 181 VKK CSPNA TFN +F I K+RDVN AHR+Y KMKEL C+ NTVTYN+LMRMF D+KS Sbjct: 378 VKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKST 437 Query: 182 DMVFKLKQEMDENEVEPNVD 241 DMV KLK+EMDE++VEPNV+ Sbjct: 438 DMVLKLKKEMDEDDVEPNVN 457 >ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial-like [Cucumis sativus] gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial-like [Cucumis sativus] Length = 534 Score = 122 bits (306), Expect = 3e-26 Identities = 55/77 (71%), Positives = 65/77 (84%) Frame = +2 Query: 5 KKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSAD 184 K C+PNA +FN IFRCI K +DVN AHRM+ +MKE+ C+PNTVTYN+LMRMFA KSAD Sbjct: 385 KNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSAD 444 Query: 185 MVFKLKQEMDENEVEPN 235 M+FKLK+EMDE EVEPN Sbjct: 445 MIFKLKKEMDEEEVEPN 461