BLASTX nr result

ID: Cimicifuga21_contig00032611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032611
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   125   4e-27
ref|XP_002307751.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   123   1e-26
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26

>ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Glycine max]
          Length = 564

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/80 (70%), Positives = 69/80 (86%)
 Frame = +2

Query: 2   VKKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSA 181
           VKK  +PNA TFN IF CI K+ DVN AHRMY +MKELNC+PNT+TYN+LMRMFA+S+S 
Sbjct: 414 VKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRST 473

Query: 182 DMVFKLKQEMDENEVEPNVD 241
           DMV K+K+EMDE++VEPNV+
Sbjct: 474 DMVLKMKKEMDESQVEPNVN 493


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492879|gb|AES74082.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/80 (73%), Positives = 67/80 (83%)
 Frame = +2

Query: 2   VKKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSA 181
           VKK  +PNA TFN IF CI ++ DVN AHRMY KMKEL C PNT+TYN+LMRMFADSKS 
Sbjct: 379 VKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSI 438

Query: 182 DMVFKLKQEMDENEVEPNVD 241
           DMV KLK+EMDE+EVEPNV+
Sbjct: 439 DMVLKLKKEMDESEVEPNVN 458


>ref|XP_002307751.1| predicted protein [Populus trichocarpa] gi|222857200|gb|EEE94747.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/79 (73%), Positives = 65/79 (82%)
 Frame = +2

Query: 5   KKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSAD 184
           KK C+PNA TFN +F CI K+ DVNAAHRMY KMKELNCE NTVTYN LM+MF  SKS D
Sbjct: 331 KKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTD 390

Query: 185 MVFKLKQEMDENEVEPNVD 241
           MV KLK EMDEN++EPNV+
Sbjct: 391 MVLKLKTEMDENKIEPNVN 409


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/80 (71%), Positives = 67/80 (83%)
 Frame = +2

Query: 2   VKKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSA 181
           VKK CSPNA TFN +F  I K+RDVN AHR+Y KMKEL C+ NTVTYN+LMRMF D+KS 
Sbjct: 378 VKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKST 437

Query: 182 DMVFKLKQEMDENEVEPNVD 241
           DMV KLK+EMDE++VEPNV+
Sbjct: 438 DMVLKLKKEMDEDDVEPNVN 457


>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
           gi|449519964|ref|XP_004167004.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/77 (71%), Positives = 65/77 (84%)
 Frame = +2

Query: 5   KKKCSPNAHTFNHIFRCIMKMRDVNAAHRMYTKMKELNCEPNTVTYNVLMRMFADSKSAD 184
           K  C+PNA +FN IFRCI K +DVN AHRM+ +MKE+ C+PNTVTYN+LMRMFA  KSAD
Sbjct: 385 KNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSAD 444

Query: 185 MVFKLKQEMDENEVEPN 235
           M+FKLK+EMDE EVEPN
Sbjct: 445 MIFKLKKEMDEEEVEPN 461


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