BLASTX nr result

ID: Cimicifuga21_contig00032584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032584
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   102   3e-20
emb|CBI19029.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002513798.1| hypothetical protein RCOM_1032100 [Ricinus c...    71   1e-10
ref|XP_003561795.1| PREDICTED: uncharacterized protein LOC100837...    70   1e-10
ref|XP_002302240.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10

>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  102 bits (254), Expect = 3e-20
 Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
 Frame = +3

Query: 51   ESMSIID--TSSLREAIGGSDDNVEPTLGNSCEVDAVSVHREEEMGDSQHQHSECVTRRY 224
            E++SI +  T +L +    + +   P L  + E         EE+GDSQ++H E VTR Y
Sbjct: 829  ETVSICNDLTQNLLQVEAKNPEKSVPGLSQNLETMINGDSVNEEVGDSQNEHVESVTREY 888

Query: 225  QVMDECSRAGFNAPHASCEIPTQ--ASSVLPETWRRLRCCHEDLKSYVTSEQRNASQIVK 398
             VMDECSR  F     S E P     ++ + ETWR+LR CH DL+ Y   EQR+ASQIV+
Sbjct: 889  PVMDECSRMAFTIGSKSLEDPRSWMVTNSVQETWRKLRGCHTDLRRYAILEQRDASQIVE 948

Query: 399  LASGFTDLISVADLMFGRCQPLISDFL 479
            L    ++LIS AD +   C PL SD L
Sbjct: 949  LTYKMSNLISEADQLRYNCHPLDSDSL 975


>emb|CBI19029.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
 Frame = +3

Query: 51   ESMSIID--TSSLREAIGGSDDNVEPTLGNSCEVDAVSVHREEEMGDSQHQHSECVTRRY 224
            E++SI +  T +L +    + +   P L  + E         EE+GDSQ++H E VTR Y
Sbjct: 614  ETVSICNDLTQNLLQVEAKNPEKSVPGLSQNLETMINGDSVNEEVGDSQNEHVESVTREY 673

Query: 225  QVMDECSRAGFNAPHASCEIPTQ--ASSVLPETWRRLRCCHEDLKSYVTSEQRNASQIVK 398
             VMDECSR  F     S E P     ++ + ETWR+L  CH DL+ Y   EQR+ASQIV+
Sbjct: 674  PVMDECSRMAFTRGSKSLEDPRSWMVTNSVQETWRKLCGCHTDLRRYAILEQRDASQIVE 733

Query: 399  LASGFTDLISVADLMFGRCQPLISDFL 479
            L    ++LIS AD +   C PL SD L
Sbjct: 734  LTYKMSNLISEADQLRYNCHPLDSDSL 760


>ref|XP_002513798.1| hypothetical protein RCOM_1032100 [Ricinus communis]
            gi|223546884|gb|EEF48381.1| hypothetical protein
            RCOM_1032100 [Ricinus communis]
          Length = 1247

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
 Frame = +3

Query: 135  SCEVDAVSVHREEEMGDSQHQHSECVTRRYQVMDECSRAGFN---APHASCEIPTQASSV 305
            +CE  AVS H  EE+ DSQ +  E +TR +Q+MDECS   F+    PH  C    +  +V
Sbjct: 946  TCEFIAVSSH--EEVEDSQIELIESITREHQLMDECSCIDFSRKVKPHEICRSSMEIDAV 1003

Query: 306  LPETWRRLRCCHEDLKSYVTSEQRNASQIVKLASGFTDLISVADLMFGRCQPLIS 470
              E+WR+LR    DL  +V +E +  S+I+++A   ++LIS A+++  +CQ L S
Sbjct: 1004 -RESWRKLRDRRGDLGHFVAAEHK-CSEIIEIACEMSNLISEAEVLHLKCQSLDS 1056


>ref|XP_003561795.1| PREDICTED: uncharacterized protein LOC100837229 [Brachypodium
            distachyon]
          Length = 1272

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
 Frame = +3

Query: 69   DTSSLREAIGGSDDNVEPTLGNSCEVDAVSVHREEEMGDSQHQHSECVTRRYQVMDECSR 248
            DT + ++ I  S   VE  +G +CE  A S  R E+        + C T  YQ+MDECS+
Sbjct: 953  DTDNAKDLIAESQKCVEDVVGETCEAYAESFGRNEQ--------TSCSTAGYQLMDECSQ 1004

Query: 249  A------GFNAPHASCEIPTQASSVLPETWRRLRCCHEDLKSYVTSEQRNASQIVKLASG 410
            A           +  C +       + +TW RLR C   L    T+  R  S  +KLAS 
Sbjct: 1005 AESIWLLSGKKTNDCCNV-----ECVQDTWNRLRRCCPVLPRE-TNHNRAVSGALKLASS 1058

Query: 411  FTDLISVADLMFGRCQPLISDFL 479
             +DLIS +DLM   C PL +D L
Sbjct: 1059 VSDLISESDLMLTGCYPLTNDLL 1081


>ref|XP_002302240.1| predicted protein [Populus trichocarpa] gi|222843966|gb|EEE81513.1|
            predicted protein [Populus trichocarpa]
          Length = 1068

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
 Frame = +3

Query: 105  DDNVEPTLGNSCEVDAVSVHREEEMGDSQHQHSECVTRRYQVMDECSRAGFNAPHASCEI 284
            D  V   LG++C+V  ++    + + DS ++H E +T+ YQVMD+ S   FN      E 
Sbjct: 945  DRYVPDMLGSTCDV--IAELSPDVVEDSLNEHVEALTKEYQVMDKYSCMDFNKKSKPVEK 1002

Query: 285  --PTQASSVLPETWRRLRCCHEDLKSYVTSEQRNASQIVKLASGFTDLISVADLMFGRCQ 458
                  + ++ E+WR+L   H DL+ +VTSE  +A+ ++ LA G ++LIS A+L+    Q
Sbjct: 1003 FRSCMMTDLVRESWRKLCNRHPDLRHFVTSEVIDATGMMDLAYGMSNLISEAELLLSNHQ 1062

Query: 459  PLIS 470
             L+S
Sbjct: 1063 TLVS 1066


Top