BLASTX nr result
ID: Cimicifuga21_contig00032574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00032574
(295 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32
emb|CBI19766.3| unnamed protein product [Vitis vinifera] 144 1e-32
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ... 134 6e-30
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab... 134 1e-29
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 144 bits (362), Expect = 1e-32
Identities = 67/97 (69%), Positives = 77/97 (79%)
Frame = +2
Query: 5 ARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI* 184
AR +FDMI ++DV+TWN+MIGGY QAG KAYDLF+ M S V PNV+TWN MISGYI
Sbjct: 410 ARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQ 469
Query: 185 KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQN 295
GDEDQAMDLF RME DG KR+ ASWN+LI+G LQN
Sbjct: 470 NGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQN 506
Score = 75.5 bits (184), Expect = 4e-12
Identities = 36/97 (37%), Positives = 59/97 (60%)
Frame = +2
Query: 5 ARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI* 184
AR F+ + RD +WN++I GY Q G K++ LF MQ ++P ++TWN++I+ Y
Sbjct: 239 ARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQ 298
Query: 185 KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQN 295
G D AM+L ++ME+ + + +W ++ISG QN
Sbjct: 299 SGKCDDAMELMKKMES-FRIVPDVFTWTSMISGFAQN 334
>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 144 bits (362), Expect = 1e-32
Identities = 67/97 (69%), Positives = 77/97 (79%)
Frame = +2
Query: 5 ARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI* 184
AR +FDMI ++DV+TWN+MIGGY QAG KAYDLF+ M S V PNV+TWN MISGYI
Sbjct: 64 ARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQ 123
Query: 185 KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQN 295
GDEDQAMDLF RME DG KR+ ASWN+LI+G LQN
Sbjct: 124 NGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQN 160
>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 887
Score = 134 bits (338), Expect = 6e-30
Identities = 61/98 (62%), Positives = 81/98 (82%)
Frame = +2
Query: 2 AARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI 181
AA++IFDM+ ERDV++WN++IGGY QAG KA++LF+ MQ S PN+ITWN+MI+GY+
Sbjct: 407 AAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYM 466
Query: 182 *KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQN 295
G EDQA+DLF+ +E DGKTKRN ASWN+LISG +Q+
Sbjct: 467 QSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQS 504
Score = 75.5 bits (184), Expect = 4e-12
Identities = 40/96 (41%), Positives = 56/96 (58%)
Frame = +2
Query: 5 ARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI* 184
A+ IFD + ERD WN MI G+ Q G +A F MQ V+P+++TWN++IS Y
Sbjct: 237 AKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQ 296
Query: 185 KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQ 292
G D A+DL R+ME G + +W ++ISG Q
Sbjct: 297 LGHCDLAIDLMRKMEWFG-IAPDVYTWTSMISGFTQ 331
>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
Length = 1490
Score = 134 bits (336), Expect = 1e-29
Identities = 59/97 (60%), Positives = 77/97 (79%)
Frame = +2
Query: 5 ARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI* 184
AR +FD + +DV+TWN+MI GY QAG KAY+LF MQ+++V+PN+ITWN MISGYI
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISGYIK 465
Query: 185 KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQN 295
GDE +AMDLF+RME DGK +RN A+WN +I+G +QN
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Score = 75.1 bits (183), Expect = 6e-12
Identities = 38/97 (39%), Positives = 56/97 (57%)
Frame = +2
Query: 5 ARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI* 184
A F + ERDV WN+++ Y Q G +A +L M+ + P ++TWN++I GY
Sbjct: 235 ATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQ 294
Query: 185 KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQN 295
G D AMDL ++ME G T + +W A+ISGL+ N
Sbjct: 295 LGKCDAAMDLMQKMENFGIT-ADVFTWTAMISGLIHN 330
Score = 61.2 bits (147), Expect = 8e-08
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = +2
Query: 47 TWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI*KGDEDQAMDLFRRM 226
TWN +IGGY Q G A DL M+N + +V TW MISG I G QA+D+FR+M
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 133 bits (334), Expect = 2e-29
Identities = 63/97 (64%), Positives = 77/97 (79%)
Frame = +2
Query: 2 AARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI 181
AAR++FD I E+DV+TWN+MIGGY QAG KAY+LF+ ++ S+V PNV+TWN MISG I
Sbjct: 404 AARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCI 463
Query: 182 *KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQ 292
GDEDQAMDLF+ ME DG KRN ASWN+LI+G Q
Sbjct: 464 QNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQ 500
Score = 69.3 bits (168), Expect = 3e-10
Identities = 38/97 (39%), Positives = 55/97 (56%)
Frame = +2
Query: 5 ARNIFDMIWERDVFTWNTMIGGYTQAGCFSKAYDLFVGMQNSSVKPNVITWNVMISGYI* 184
AR F + ERD +WN MI GY Q G +A L M N KP ++T+N+MI+ Y
Sbjct: 234 ARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQ 293
Query: 185 KGDEDQAMDLFRRMETDGKTKRNPASWNALISGLLQN 295
GD D +DL ++ME+ G + +W ++ISG Q+
Sbjct: 294 LGDCDLVIDLKKKMESVGLAP-DVYTWTSMISGFSQS 329